Gene: AT5G61420

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G61420
  • Transcript Identifier AT5G61420.2
  • Gene Type Coding gene
  • Location Chr5 : 24689475-24690795 : negative

Gene Family Information

  • ID HOM05D000008
  • #Genes/#Species 9932/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G61420.2
  • symbol MYB28
  • Alias AtMYB28,HAG1,HIGH ALIPHATIC GLUCOSINOLATE 1,PMG1,PRODUCTION OF METHIONINE-DERIVED GLUCOSINOLATE 1
  • uniprot Q9SPG2

Descriptions

  • Description myb domain protein 28
  • Computational description myb domain protein 28 (MYB28); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 76 (TAIR:AT5G07700.1); Has 5906 Blast hits to 5134 proteins in 359 species: Archae - 0; Bacteria - 112; Metazoa - 464; Fungi - 135; Plants - 4393; Viruses - 3; Other Eukaryotes - 799 (source: NCBI BLink).
  • Computational description myb domain protein 28 (MYB28); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 29 (TAIR:AT5G07690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEP
Gene Ontologyregulation of transcription, DNA-templated1
GO:0010438
TAS
Gene Ontologycellular response to sulfur starvation1
GO:0010439
IMP
Gene Ontologyregulation of glucosinolate biosynthetic process1
GO:0050832
IMP
Gene Ontologydefense response to fungus2
GO:0009617
IMP
Gene Ontologyresponse to bacterium3
GO:0009682
IMP
Gene Ontologyinduced systemic resistance3
GO:0009625
IEP
Gene Ontologyresponse to insect4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
ISS
NAS
Gene OntologyDNA-binding transcription factor activity1 5
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding6
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus7

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001005 SANT/Myb domain
IPR009057 Homeobox-like domain superfamily
IPR017930 Myb domain
Mapman id Description
15.5.2.1 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)