Gene: Sopen02g032590

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g032590
  • Transcript Identifier Sopen02g032590.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 54307209-54314424 : negative

Gene Family Information

  • ID HOM05D000068
  • #Genes/#Species 3957/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g032590.1

Descriptions

  • Description Belongs to the family of ATP-binding cassette (ABC) transporters. Also known as AtMDR11 and PGP19. Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root. Acts upstream of phyA in regulating hypocotyl elongation and gravitropic response. Exerts nonredundant, partially overlapping functions with the ABC transporter encoded by AtPGP1. | ATP binding cassette subfamily B19 (ABCB19) | FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, auxin efflux transmembrane transporter activity | INVOLVED IN: in 14 processes | LOCATED IN: plasma membrane | EXPRESSED IN: 28 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core , ABC transporter-like , ABC transporter, transmembrane domain, type 1 , ABC transporter integral membrane type 1 , ABC transporter, transmembrane domain , ABC transporter, conserved site | BEST Arabidopsis thaliana protein match is: ATP binding cassette subfamily B1
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT3G28860
GO:0010540
ISO
PLAZA Integrative Orthologybasipetal auxin transport AT3G28860
GO:0010541
ISO
PLAZA Integrative Orthologyacropetal auxin transport AT3G28860
GO:0048443
ISO
PLAZA Integrative Orthologystamen development AT3G28860
GO:0043481
ISO
PLAZA Integrative Orthologyanthocyanin accumulation in tissues in response to UV light AT3G28860
GO:0010218
ISO
PLAZA Integrative Orthologyresponse to far red light AT3G28860
GO:0009958
ISO
PLAZA Integrative Orthologypositive gravitropism AT3G28860
GO:0009639
ISO
PLAZA Integrative Orthologyresponse to red or far red light AT3G28860
GO:0009926
ISO
PLAZA Integrative Orthologyauxin polar transport AT3G28860
GO:0060918
ISO
PLAZA Integrative Orthologyauxin transport AT3G28860
GO:0048527
ISO
PLAZA Integrative Orthologylateral root development AT3G28860
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT3G28860
GO:0009637
ISO
PLAZA Integrative Orthologyresponse to blue light AT3G28860
GO:0090691
ISO
PLAZA Integrative Orthologyformation of plant organ boundary AT3G28860
GO:0008361
ISO
PLAZA Integrative Orthologyregulation of cell size AT3G28860
GO:0009640
ISO
PLAZA Integrative Orthologyphotomorphogenesis AT3G28860
GO:0055085
IEA
InterProtransmembrane transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010329
ISO
PLAZA Integrative Orthologyauxin efflux transmembrane transporter activity AT3G28860
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G28860
GO:0005524
IEA
InterProATP binding
GO:0140359
IEA
InterProABC-type transporter activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G28860
GO:0016021
IEA
InterProintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003439 ABC transporter-like, ATP-binding domain
IPR039421 Type 1 protein exporter
IPR036640 ABC transporter type 1, transmembrane domain superfamily
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR011527 ABC transporter type 1, transmembrane domain
IPR003593 AAA+ ATPase domain
Mapman id Description
11.2.4.3 Phytohormone action.auxin.transport.auxin efflux transporter (ABCB19)
24.1.3.1.1 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter