Gene: AT3G28860
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G28860
- Transcript Identifier AT3G28860.1
- Gene Type Coding gene
- Location Chr3 : 10870287-10877286 : negative
Gene Family Information
- ID HOM05D000068
- #Genes/#Species 3957/100
- Phylogenetic origin
- ID ORTHO05D000084
- #Genes/#Species 2339/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT3G28860.1
- symbol ABCB19
- Alias ATABCB19,Arabidopsis thaliana ATP-binding cassette B19,ATMDR1,ATMDR11,MULTIDRUG RESISTANCE PROTEIN 11,ATPGP19,MDR1,MDR11,PGP19,P-GLYCOPROTEIN 19
- full_name ATP-binding cassette B19
- uniprot Q9LJX0
Descriptions
- Description ATP binding cassette subfamily B19
- Computational description ATP binding cassette subfamily B19 (ABCB19); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, auxin efflux transmembrane transporter activity; INVOLVED IN: in 14 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ATP binding cassette subfamily B1 (TAIR:AT2G36910.1); Has 832220 Blast hits to 388750 proteins in 4155 species: Archae - 14331; Bacteria - 653917; Metazoa - 17455; Fungi - 11958; Plants - 9253; Viruses - 33; Other Eukaryotes - 125273 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0048443 | IGI | Gene Ontology | stamen development | 1 |
GO:0060918 | IMP | Gene Ontology | auxin transport | 2 |
GO:0090691 | IMP | Gene Ontology | formation of plant organ boundary | 2 |
GO:0055085 | IEA | GOA Database | transmembrane transport | |
GO:0055085 | IBA | Gene Ontology | transmembrane transport | 3 |
GO:0055085 | IEA | InterPro | transmembrane transport | |
GO:0010315 | IEA | GOA Database | auxin efflux | |
GO:0048527 | IMP | Gene Ontology | lateral root development | 4 |
GO:0009734 | IEA | GOA Database | auxin-activated signaling pathway | |
GO:0009958 | IMP | Gene Ontology | positive gravitropism | 5 |
GO:0009926 | IMP | Gene Ontology | auxin polar transport | 6 |
GO:0010540 | IMP | Gene Ontology | basipetal auxin transport | 6 |
GO:0008361 | IMP | Gene Ontology | regulation of cell size | 5 |
GO:0009637 | IMP | Gene Ontology | response to blue light | 5 |
GO:0009639 | IMP | Gene Ontology | response to red or far red light | 5 |
GO:0009640 | IMP | Gene Ontology | photomorphogenesis | 5 |
GO:0009733 | IMP | Gene Ontology | response to auxin | 5 |
GO:0010218 | IMP | Gene Ontology | response to far red light | 5 |
GO:0043481 | IMP | Gene Ontology | anthocyanin accumulation in tissues in response to UV light | 5 |
GO:0010541 | IMP | Gene Ontology | acropetal auxin transport | 7 |
GO:0048364 | IMP | Gene Ontology | root development | 7 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0000166 | IEA | GOA Database | nucleotide binding | |
GO:0042626 | ISS, IBA | Gene Ontology | ATPase-coupled transmembrane transporter activity | 3 |
GO:0005524 | IEA | GOA Database | ATP binding | |
GO:0005524 | IEA | InterPro | ATP binding | |
GO:0140359 | IEA | Gene Ontology | ABC-type transporter activity | |
GO:0140359 | IEA | InterPro | ABC-type transporter activity | |
GO:0010329 | IDA | Gene Ontology | auxin efflux transmembrane transporter activity | 8 |
GO:0005515 | IPI | Gene Ontology | protein binding | 9 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005829 | HDA | Gene Ontology | cytosol | 10 |
GO:0016021 | IEA | GOA Database | integral component of membrane | |
GO:0016021 | IBA | Gene Ontology | integral component of membrane | 3 |
GO:0016021 | IEA | InterPro | integral component of membrane | |
GO:0005886 | IEA | GOA Database | plasma membrane | |
GO:0005886 | IDA, HDA | Gene Ontology | plasma membrane | 8 11 |
GO:0016020 | IEA | GOA Database | membrane | |
GO:0005634 | ISM | Gene Ontology | nucleus |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR003439 | ABC transporter-like, ATP-binding domain |
IPR036640 | ABC transporter type 1, transmembrane domain superfamily |
IPR011527 | ABC transporter type 1, transmembrane domain |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
IPR003593 | AAA+ ATPase domain |
IPR039421 | Type 1 protein exporter |
Mapman id | Description |
---|---|
11.2.4.3 | Phytohormone action.auxin.transport.auxin efflux transporter (ABCB19) |
24.1.3.1.1 | Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter |