Gene: Sopen02g030550

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g030550
  • Transcript Identifier Sopen02g030550.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 52646998-52648671 : positive

Gene Family Information

  • ID HOM05D000145
  • #Genes/#Species 2562/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g030550.1

Descriptions

  • Description Encodes KCS6, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). | 3-ketoacyl-CoA synthase 6 (KCS6) | FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity | INVOLVED IN: in 7 processes | LOCATED IN: endoplasmic reticulum | EXPRESSED IN: 29 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Thiolase-like , FAE1/Type III polyketide synthase-like protein , Thiolase-like, subgroup | BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 5
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006633
IEA
InterProfatty acid biosynthetic process
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT1G25450
GO:0009826
ISO
PLAZA Integrative Orthologyunidimensional cell growth AT1G68530
GO:0000038
ISO
PLAZA Integrative Orthologyvery long-chain fatty acid metabolic process AT1G25450
GO:0042335
ISO
PLAZA Integrative Orthologycuticle development AT1G25450
GO:0009416
ISO
PLAZA Integrative Orthologyresponse to light stimulus AT1G25450
GO:0048868
ISO
PLAZA Integrative Orthologypollen tube development AT1G25450
GO:0010025
ISO
PLAZA Integrative Orthologywax biosynthetic process AT1G68530

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016747
IEA
InterProacyltransferase activity, transferring groups other than amino-acyl groups
GO:0016746
IEA
InterProacyltransferase activity
GO:0009922
ISO
PLAZA Integrative Orthologyfatty acid elongase activity AT1G25450

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
InterPromembrane
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT1G25450

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012392 Very-long-chain 3-ketoacyl-CoA synthase
IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal
IPR016039 Thiolase-like
IPR013601 FAE1/Type III polyketide synthase-like protein
Mapman id Description
5.1.6.1.4.1 Lipid metabolism.fatty acid biosynthesis.endoplasmic reticulum-localized fatty acid elongase (FAE) system.fatty acid elongation complex.condensing enzyme activities.3-ketoacyl-CoA synthase (KCS)