Gene: Sopen02g029890

General Information

Structural Information

Species Solanum pennellii
Gene Identifier Sopen02g029890
Transcript Identifier Sopen02g029890.1
Gene Type Coding gene
Location Spenn-ch02 : 52126494-52127317 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D002935
#Genes/#Species 235/89
Phylogenetic origin

ID ORTHO05D000079
#Genes/#Species 2384/100
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

tid Sopen02g029890.1

Descriptions

Short descriptions
Ortholog descriptions

Description Encodes a GATA factort transcriptional regulator required to position the proembryo boundary in the early embryo. | MONOPOLE (MNP) | CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type , Zinc finger, GATA-type | BEST Arabidopsis thaliana protein match is: GATA transcription factor 19

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009909	ISO	PLAZA Integrative Orthology	regulation of flower development	AT3G50870
GO:0048825	ISO	PLAZA Integrative Orthology	cotyledon development	AT3G50870
GO:0009934	ISO	PLAZA Integrative Orthology	regulation of meristem structural organization	AT3G50870
GO:0048437	ISO	PLAZA Integrative Orthology	floral organ development	Os05g0578900
GO:0048510	ISO	PLAZA Integrative Orthology	regulation of timing of transition from vegetative to reproductive phase	Os05g0578900
GO:0009793	ISO	PLAZA Integrative Orthology	embryo development ending in seed dormancy	AT3G50870
GO:0045892	ISO	PLAZA Integrative Orthology	negative regulation of transcription, DNA-templated	AT3G50870
GO:0006355	IEA	InterPro	regulation of transcription, DNA-templated
GO:0009908	IEA	InterPro	flower development

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0001228	ISO	PLAZA Integrative Orthology	DNA-binding transcription activator activity, RNA polymerase II-specific	AT3G50870
GO:0000976	ISO	PLAZA Integrative Orthology	transcription cis-regulatory region binding	AT2G18380
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT3G50870
GO:0042803	ISO	PLAZA Integrative Orthology	protein homodimerization activity	AT3G50870
GO:0003700	IEA	InterPro	DNA-binding transcription factor activity
GO:0043565	IEA	InterPro	sequence-specific DNA binding
GO:0008270	IEA	InterPro	zinc ion binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT3G50870

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR000679	Zinc finger, GATA-type
IPR044272	GATA transcription factor 18/19/20
IPR013088	Zinc finger, NHR/GATA-type

Mapman id	Description
15.5.1.3.1	RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.GATA trancription factor families.transcription factor (A/B-GATA)