Gene: AT3G50870

General Information

Structural Information

Species Arabidopsis thaliana
Gene Identifier AT3G50870
Transcript Identifier AT3G50870.1
Gene Type Coding gene
Location Chr3 : 18911112-18912369 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D002935
#Genes/#Species 235/89
Phylogenetic origin

ID ORTHO05D000079
#Genes/#Species 2384/100
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

tid AT3G50870.1
symbol MNP
Alias AtGATA18,GATA18,GATA TRANSCRIPTION FACTOR 18,HAN,HANABA TANARU
full_name MONOPOLE
uniprot Q8LC79

Descriptions

Description GATA type zinc finger transcription factor family protein

Computational description MONOPOLE (MNP); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 19 (TAIR:AT4G36620.1); Has 2164 Blast hits to 2065 proteins in 231 species: Archae - 0; Bacteria - 0; Metazoa - 372; Fungi - 903; Plants - 779; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink).

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009909	IMP, IGI	Gene Ontology	regulation of flower development	1 2
GO:0009908	IEA	GOA Database	flower development
GO:0009908	IMP	Gene Ontology	flower development	3
GO:0009908	IEA	InterPro	flower development
GO:0006355	IEA	GOA Database	regulation of transcription, DNA-templated
GO:0006355	IEP	Gene Ontology	regulation of transcription, DNA-templated	4
GO:0006355	IEA	InterPro	regulation of transcription, DNA-templated
GO:0045944	IEA	GOA Database	positive regulation of transcription by RNA polymerase II
GO:0009934	IMP	Gene Ontology	regulation of meristem structural organization	2
GO:0045892	IDA, IMP	Gene Ontology	negative regulation of transcription, DNA-templated	3
GO:0048825	IMP	Gene Ontology	cotyledon development	5
GO:0009793	IMP	Gene Ontology	embryo development ending in seed dormancy	4

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003700	IEA	GOA Database	DNA-binding transcription factor activity
GO:0003700	IDA ISS	Gene Ontology	DNA-binding transcription factor activity	2 6
GO:0003700	IEA	InterPro	DNA-binding transcription factor activity
GO:0043565	IEA	GOA Database	sequence-specific DNA binding
GO:0043565	IDA	Gene Ontology	sequence-specific DNA binding	2
GO:0043565	IEA	InterPro	sequence-specific DNA binding
GO:0008270	IEA	Gene Ontology	zinc ion binding
GO:0008270	IEA	InterPro	zinc ion binding
GO:0003677	IEA	GOA Database	DNA binding
GO:0046872	IEA	GOA Database	metal ion binding
GO:0001228	IDA	Gene Ontology	DNA-binding transcription activator activity, RNA polymerase II-specific	2
GO:0042803	IDA	Gene Ontology	protein homodimerization activity	3
GO:0005515	IPI	Gene Ontology	protein binding	3

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	IEA	GOA Database	nucleus
GO:0005634	IDA ISM	Gene Ontology	nucleus	4

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR000679	Zinc finger, GATA-type
IPR044272	GATA transcription factor 18/19/20
IPR013088	Zinc finger, NHR/GATA-type

Mapman id	Description
15.5.1.3.1	RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.GATA trancription factor families.transcription factor (A/B-GATA)