Gene: Sopen02g029820

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g029820
  • Transcript Identifier Sopen02g029820.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 52070331-52072000 : positive

Gene Family Information

  • ID HOM05D000472
  • #Genes/#Species 1118/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g029820.1

Descriptions

  • Description Member of TLP family | tubby like protein 2 (TLP2) | CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like , Tubby, C-terminal, conserved site , Tubby, C-terminal | BEST Arabidopsis thaliana protein match is: tubby like protein 3
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT1G47270
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT1G47270
GO:0009620
ISO
PLAZA Integrative Orthologyresponse to fungus AT2G18280

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G47270

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G18280
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G18280
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT2G18280
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT2G18280

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR025659 Tubby-like, C-terminal
IPR000007 Tubby, C-terminal
IPR001810 F-box domain
IPR036047 F-box-like domain superfamily
Mapman id Description
15.5.21 RNA biosynthesis.transcriptional regulation.transcription factor (TUB)