Gene: AT2G18280

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G18280
  • Transcript Identifier AT2G18280.2
  • Gene Type Coding gene
  • Location Chr2 : 7946754-7948176 : positive

Gene Family Information

  • ID HOM05D000472
  • #Genes/#Species 1118/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G18280.2
  • symbol TLP2
  • Alias AtTLP2,tubby like protein 2
  • uniprot Q8GVE5

Descriptions

  • Description tubby like protein 2
  • Computational description tubby like protein 2 (TLP2); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 3 (TAIR:AT2G47900.3); Has 957 Blast hits to 948 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 352; Fungi - 19; Plants - 471; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink).
  • Computational description tubby like protein 2 (TLP2); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 3 (TAIR:AT2G47900.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
TAS
Gene Ontologyregulation of transcription, DNA-templated1
GO:0009620
IMP
Gene Ontologyresponse to fungus2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding3
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0005634
IDA
Gene Ontologynucleus2
GO:0005829
IDA
Gene Ontologycytosol2
GO:0005886
IDA
Gene Ontologyplasma membrane2
GO:0009536
IDA
Gene Ontologyplastid2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000007 Tubby, C-terminal
IPR025659 Tubby-like, C-terminal
IPR001810 F-box domain
IPR036047 F-box-like domain superfamily
Mapman id Description
15.5.21 RNA biosynthesis.transcriptional regulation.transcription factor (TUB)