Gene: Sopen02g029400

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g029400
  • Transcript Identifier Sopen02g029400.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 51782130-51783721 : positive

Gene Family Information

  • ID HOM05D002539
  • #Genes/#Species 267/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g029400.1

Descriptions

  • Description Ribosomal RNA adenine dimethylase family protein | FUNCTIONS IN: rRNA methyltransferase activity, rRNA (adenine-N6,N6-)-dimethyltransferase activity, rRNA (adenine) methyltransferase activity | INVOLVED IN: rRNA modification, rRNA processing | LOCATED IN: cellular_component unknown | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal RNA adenine methylase transferase, N-terminal , Ribosomal RNA adenine dimethylase , Ribosomal RNA adenine methylase transferase, conserved site , Ribosomal RNA adenine methylase transferase | BEST Arabidopsis thaliana protein match is: Ribosomal RNA adenine dimethylase family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000154
IEA
InterProrRNA modification
GO:0006364
IEA
InterProrRNA processing
GO:0046085
ISO
PLAZA Integrative Orthologyadenosine metabolic process AT5G66360

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000179
IEA
InterProrRNA (adenine-N6,N6-)-dimethyltransferase activity
GO:0008649
IEA
InterProrRNA methyltransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G66360

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal
IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
IPR011530 Ribosomal RNA adenine dimethylase
Mapman id Description
17.1.1.2.1.2 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.methylation.rRNA adenosine dimethylase (DIM1B)