Gene: AT5G66360

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G66360
  • Transcript Identifier AT5G66360.2
  • Gene Type Coding gene
  • Location Chr5 : 26510329-26511711 : positive

Gene Family Information

  • ID HOM05D002539
  • #Genes/#Species 267/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G66360.2
  • symbol DIM1B
  • full_name adenosine dimethyl transferase 1B
  • uniprot Q9FK02

Descriptions

  • Description Ribosomal RNA adenine dimethylase family protein
  • Computational description Ribosomal RNA adenine dimethylase family protein; FUNCTIONS IN: rRNA methyltransferase activity, rRNA (adenine-N6,N6-)-dimethyltransferase activity; INVOLVED IN: rRNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA adenine methylase transferase, N-terminal (InterPro:IPR020598), Ribosomal RNA adenine methylase transferase, conserved site (InterPro:IPR020596), Ribosomal RNA adenine methylase transferase (InterPro:IPR001737); BEST Arabidopsis thaliana protein match is: Ribosomal RNA adenine dimethylase family protein (TAIR:AT2G47420.1); Has 10133 Blast hits to 10130 proteins in 3048 species: Archae - 291; Bacteria - 6778; Metazoa - 278; Fungi - 201; Plants - 119; Viruses - 0; Other Eukaryotes - 2466 (source: NCBI BLink).
  • Computational description Ribosomal RNA adenine dimethylase family protein; FUNCTIONS IN: rRNA methyltransferase activity, rRNA (adenine-N6,N6-)-dimethyltransferase activity, rRNA (adenine) methyltransferase activity; INVOLVED IN: rRNA modification, rRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA adenine methylase transferase, N-terminal (InterPro:IPR020598), Ribosomal RNA adenine dimethylase (InterPro:IPR011530), Ribosomal RNA adenine methylase transferase, conserved site (InterPro:IPR020596), Ribosomal RNA adenine methylase transferase (InterPro:IPR001737); BEST Arabidopsis thaliana protein match is: Ribosomal RNA adenine dimethylase family protein (TAIR:AT2G47420.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000154
IEA
GOA DatabaserRNA modification
GO:0000154
IGI
Gene OntologyrRNA modification1
GO:0000154
IEA
InterProrRNA modification
GO:0006364
IEA
GOA DatabaserRNA processing
GO:0006364
IEA
InterProrRNA processing
GO:0032259
IEA
GOA Databasemethylation
GO:0031167
IBA
Gene OntologyrRNA methylation2
GO:0046085
IMP
Gene Ontologyadenosine metabolic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0008649
IEA
GOA DatabaserRNA methyltransferase activity
GO:0008649
IEA
InterProrRNA methyltransferase activity
GO:0000179
IEA
GOA DatabaserRNA (adenine-N6,N6-)-dimethyltransferase activity
GO:0000179
IGI
IBA
Gene OntologyrRNA (adenine-N6,N6-)-dimethyltransferase activity1 2
GO:0000179
IEA
InterProrRNA (adenine-N6,N6-)-dimethyltransferase activity
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005739
IEA
GOA Databasemitochondrion
GO:0005739
IDA
Gene Ontologymitochondrion1
GO:0005759
IBA
Gene Ontologymitochondrial matrix2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm
IPR011530 Ribosomal RNA adenine dimethylase
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal
Mapman id Description
17.1.1.2.1.2 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.methylation.rRNA adenosine dimethylase (DIM1B)