Gene: Sopen02g029060

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g029060
  • Transcript Identifier Sopen02g029060.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 51471205-51473113 : negative

Gene Family Information

  • ID HOM05D000010
  • #Genes/#Species 9383/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g029060.1

Descriptions

  • Description Encodes a NAC-domain transcription factor. Expressed in the vascular tissue. | vascular related NAC-domain protein 1 (VND1) | CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein | BEST Arabidopsis thaliana protein match is: NAC domain containing protein 76
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0010200
ISO
PLAZA Integrative Orthologyresponse to chitin AT2G18060
GO:1901348
ISO
PLAZA Integrative Orthologypositive regulation of secondary cell wall biogenesis AT4G36160
GO:0048759
ISO
PLAZA Integrative Orthologyxylem vessel member cell differentiation AT4G36160
GO:1990110
ISO
PLAZA Integrative Orthologycallus formation AT2G18060

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G36160
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT4G36160

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G36160

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003441 NAC domain
IPR036093 NAC domain superfamily
Mapman id Description
15.5.17 RNA biosynthesis.transcriptional regulation.transcription factor (NAC)