Gene: AT2G18060
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G18060
- Transcript Identifier AT2G18060.1
- Gene Type Coding gene
- Location Chr2 : 7848399-7850303 : negative
Gene Family Information
- ID HOM05D000010
- #Genes/#Species 9383/97
- Phylogenetic origin
- ID ORTHO05D000063
- #Genes/#Species 2631/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT2G18060.1
- symbol VND1
- Alias ANAC037,Arabidopsis NAC domain containing protein 37
- uniprot Q9SL41
Descriptions
- Description vascular related NAC-domain protein 1
- Computational description vascular related NAC-domain protein 1 (VND1); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 76 (TAIR:AT4G36160.1); Has 3025 Blast hits to 3020 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3025; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IMP TAS, IEA | Gene Ontology | regulation of transcription, DNA-templated | 1 2 |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0071555 | IEA | GOA Database | cell wall organization | |
| GO:0010200 | IEP | GOA Database | response to chitin | |
| GO:1901348 | IMP | Gene Ontology | positive regulation of secondary cell wall biogenesis | 2 |
| GO:0048759 | IMP ISS | Gene Ontology | xylem vessel member cell differentiation | 2 |
| GO:1990110 | IEP | Gene Ontology | callus formation | 3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000976 | IPI | Gene Ontology | transcription cis-regulatory region binding | 4 |
| GO:0003677 | IEA | Gene Ontology | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0005515 | IPI | Gene Ontology | protein binding | 5 |
| GO:0043565 | ISS | Gene Ontology | sequence-specific DNA binding | |
| GO:0003700 | ISS | Gene Ontology | DNA-binding transcription factor activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM | Gene Ontology | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.17 | RNA biosynthesis.transcriptional regulation.transcription factor (NAC) |