Gene: Sopen02g025960
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen02g025960
- Transcript Identifier Sopen02g025960.1
- Gene Type Coding gene
- Location Spenn-ch02 : 49042479-49045527 : positive
Gene Family Information
- ID HOM05D001875
- #Genes/#Species 351/99
- Phylogenetic origin
- ID ORTHO05D002019
- #Genes/#Species 326/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen02g025960.1
Descriptions
- Description Phytoene synthase, chloroplast precursor (EC 2.5.1.-) - Capsicum annuum (Bell pepper), Encodes phytoene synthase. | PHYTOENE SYNTHASE (PSY) | CONTAINS InterPro DOMAIN/s: Squalene/phytoene synthase, conserved site , Terpenoid synthase , Squalene/phytoene synthase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009058 | IEA | InterPro | biosynthetic process | |
GO:0016117 | ISO | PLAZA Integrative Orthology | carotenoid biosynthetic process | Solyc02g081330.4 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0004311 | IEA | InterPro | farnesyltranstransferase activity | |
GO:0016740 | IEA | InterPro | transferase activity | |
GO:0046905 | ISO | PLAZA Integrative Orthology | 15-cis-phytoene synthase activity | Zm00001eb367770 |
GO:0016767 | ISO | PLAZA Integrative Orthology | geranylgeranyl-diphosphate geranylgeranyltransferase activity | Zm00001eb367770 |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G17230 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G17230 |
GO:0010287 | ISO | PLAZA Integrative Orthology | plastoglobule | Zm00001eb367770 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
9.1.6.1.1 | Secondary metabolism.terpenoids.carotenoid biosynthesis.carotenes.phytoene synthase (PSY) |