Gene: Sopen02g025860

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g025860
  • Transcript Identifier Sopen02g025860.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 48969191-48970780 : positive

Gene Family Information

  • ID HOM05D000128
  • #Genes/#Species 2706/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g025860.1

Descriptions

  • Description FAD-binding Berberine family protein | FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity | LOCATED IN: apoplast, plasma membrane | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 10 growth stages | CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 , Berberine/berberine-like , FAD linked oxidase, N-terminal | BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT2G34810
GO:0009753
ISO
PLAZA Integrative Orthologyresponse to jasmonic acid AT2G34810
GO:0071456
ISO
PLAZA Integrative Orthologycellular response to hypoxia AT1G26410

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016491
IEA
InterProoxidoreductase activity
GO:0050660
IEA
InterProflavin adenine dinucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G30740
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT1G26380
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT1G30740

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006094 FAD linked oxidase, N-terminal
IPR036318 FAD-binding, type PCMH-like superfamily
IPR016169 FAD-binding, type PCMH, subdomain 2
IPR012951 Berberine/berberine-like
IPR016167 FAD-binding, type PCMH, subdomain 1
Mapman id Description
50.1.1 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor