Gene: Sopen02g025070
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen02g025070
- Transcript Identifier Sopen02g025070.1
- Gene Type Coding gene
- Location Spenn-ch02 : 48254210-48260954 : positive
Gene Family Information
- ID HOM05D001248
- #Genes/#Species 499/99
- Phylogenetic origin
- ID ORTHO05D001183
- #Genes/#Species 463/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen02g025070.1
Descriptions
- Description encodes a host factor that is required for TMV virus multiplication. | tobamovirus multiplication 1 (TOM1) | INVOLVED IN: viral replication complex formation and maintenance | LOCATED IN: vacuolar membrane, plasma membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 | BEST Arabidopsis thaliana protein match is: tobamovirus multiplication protein 3
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046786 | ISO | PLAZA Integrative Orthology | viral replication complex formation and maintenance | AT4G21790 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G21790 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009705 | ISO | PLAZA Integrative Orthology | plant-type vacuole membrane | AT4G21790 |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT4G21790 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 26.11.2.1 | External stimuli response.virus.tobamovirus multiplication.replication host factor (TOM1) |