Gene: Sopen02g022010

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g022010
  • Transcript Identifier Sopen02g022010.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 45590363-45594064 : positive

Gene Family Information

  • ID HOM05D000043
  • #Genes/#Species 4839/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g022010.1

Descriptions

  • Description Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff, Wolf Scheible, 2010, personal communication). | TRICHOME BIREFRINGENCE-LIKE 38 (TBL38) | INVOLVED IN: biological_process unknown | LOCATED IN: endomembrane system | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 12 growth stages | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant | BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 37
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009827
ISO
PLAZA Integrative Orthologyplant-type cell wall modification AT2G34070
GO:0009867
ISO
PLAZA Integrative Orthologyjasmonic acid mediated signaling pathway AT2G34070

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT2G34070
GO:0016413
ISO
PLAZA Integrative OrthologyO-acetyltransferase activity AT2G34070

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT2G42570
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT2G34070
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT2G42570

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR026057 PC-Esterase
IPR029962 Trichome birefringence-like family
IPR025846 PMR5 N-terminal domain
Mapman id Description
35.1 not assigned.annotated