Gene: Sopen02g022010
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen02g022010
- Transcript Identifier Sopen02g022010.1
- Gene Type Coding gene
- Location Spenn-ch02 : 45590363-45594064 : positive
Gene Family Information
- ID HOM05D000043
- #Genes/#Species 4839/97
- Phylogenetic origin
- ID ORTHO05D000223
- #Genes/#Species 1355/92
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen02g022010.1
Descriptions
- Description Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff, Wolf Scheible, 2010, personal communication). | TRICHOME BIREFRINGENCE-LIKE 38 (TBL38) | INVOLVED IN: biological_process unknown | LOCATED IN: endomembrane system | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 12 growth stages | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant | BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 37
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009827 | ISO | PLAZA Integrative Orthology | plant-type cell wall modification | AT2G34070 |
| GO:0009867 | ISO | PLAZA Integrative Orthology | jasmonic acid mediated signaling pathway | AT2G34070 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043565 | ISO | PLAZA Integrative Orthology | sequence-specific DNA binding | AT2G34070 |
| GO:0016413 | ISO | PLAZA Integrative Orthology | O-acetyltransferase activity | AT2G34070 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT2G42570 |
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT2G34070 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT2G42570 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |