Gene: Sopen02g020310

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g020310
  • Transcript Identifier Sopen02g020310.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 44094301-44099657 : negative

Gene Family Information

  • ID HOM05D001132
  • #Genes/#Species 545/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g020310.1

Descriptions

  • Description Encodes a SCP1-like small phosphatase (SSP). Three SSPs form a unique group with long N-terminal extensions: AT5G46410 (SSP4), AT5G11860 (SSP5), AT4G18140 (SSP4b). SSP4 and SSP4b were localized exclusively in the nuclei, whereas SSP5 accumulated in both nuclei and cytoplasm. All three SSPs encodes active CTD phosphatases like animal SCP1 family proteins, with distinct substrate specificities: SSP4 and SSP4b could dephosphorylate both Ser2-PO(4) and Ser5-PO(4) of CTD, whereas SSP5 dephosphorylated only Ser5-PO(4). | SCP1-like small phosphatase 4 (SSP4) | CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain , NLI interacting factor | BEST Arabidopsis thaliana protein match is: SCP1-like small phosphatase 4b
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006470
ISO
PLAZA Integrative Orthologyprotein dephosphorylation AT4G18140

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016791
IEA
InterProphosphatase activity
GO:0008420
ISO
PLAZA Integrative OrthologyRNA polymerase II CTD heptapeptide repeat phosphatase activity AT4G18140

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G18140

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004274 FCP1 homology domain
IPR023214 HAD superfamily
IPR011948 Dullard phosphatase domain, eukaryotic
IPR036412 HAD-like superfamily
Mapman id Description
15.3.2.4 RNA biosynthesis.RNA polymerase II-dependent transcription.RNA polymerase-II phosphorylation/dephosphorylation.group-III phosphatase
18.4.26.1.1 Protein modification.phosphorylation.protein aspartate phosphatase superfamily.FCP phosphatase families.subcluster B phosphatase