Gene: Sopen02g020230
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen02g020230
- Transcript Identifier Sopen02g020230.1
- Gene Type Coding gene
- Location Spenn-ch02 : 44007121-44014219 : negative
Gene Family Information
- ID HOM05D005404
- #Genes/#Species 141/94
- Phylogenetic origin
- ID ORTHO05D006623
- #Genes/#Species 140/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen02g020230.1
Descriptions
- Description double-stranded DNA-binding family protein | FUNCTIONS IN: double-stranded DNA binding, DNA binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: DNA-binding TFAR19-related protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006281 | ISO | PLAZA Integrative Orthology | DNA repair | AT1G29850 |
| GO:0012501 | ISO | PLAZA Integrative Orthology | programmed cell death | AT1G29850 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G29850 |
| GO:0003684 | ISO | PLAZA Integrative Orthology | damaged DNA binding | AT1G29850 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G29850 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G29850 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 27.2.8 | Multi-process regulation.Programmed Cell Death (PCD) system.PCD regulatory factor (PDCD5) |