Gene: Sopen02g016500

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g016500
  • Transcript Identifier Sopen02g016500.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 40733497-40738307 : negative

Gene Family Information

  • ID HOM05D001104
  • #Genes/#Species 555/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g016500.1

Descriptions

  • Description Encodes DEG8. Forms a hexamer with DEG5 in the thylakoid lumen. Involved in the cleavage of photodamaged D2 protein of photosystem II (PSII). Recombinant DEG8 is proteolytically active toward both a model substrate (beta-casein) and photodamaged D1 protein of photosystem II. | DEG8 | FUNCTIONS IN: serine-type peptidase activity, peptidase activity | INVOLVED IN: photosystem II repair, proteolysis | LOCATED IN: thylakoid, chloroplast thylakoid lumen, chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like , Peptidase S1C, HrtA/DegP2/Q/S , Peptidase S1/S6, chymotrypsin/Hap , PDZ/DHR/GLGF | BEST Arabidopsis thaliana protein match is: DegP protease 1
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006508
IEA
InterProproteolysis
GO:0010206
ISO
PLAZA Integrative Orthologyphotosystem II repair AT5G39830

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004252
IEA
InterProserine-type endopeptidase activity
GO:0005515
IEA
InterProprotein binding
GO:0008233
ISO
PLAZA Integrative Orthologypeptidase activity AT5G39830

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G39830
GO:0031977
ISO
PLAZA Integrative Orthologythylakoid lumen AT5G39830
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT5G39830
GO:0009543
ISO
PLAZA Integrative Orthologychloroplast thylakoid lumen AT5G39830
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT5G39830

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001940 Peptidase S1C
IPR036034 PDZ superfamily
IPR009003 Peptidase S1, PA clan
IPR043504 Peptidase S1, PA clan, chymotrypsin-like fold
IPR001478 PDZ domain
Mapman id Description
19.4.2.3 Protein homeostasis.proteolysis.serine-type peptidase activities.S1-class protease (Deg)