Gene: Sopen02g015870

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g015870
  • Transcript Identifier Sopen02g015870.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 39991445-39995832 : negative

Gene Family Information

  • ID HOM05D002721
  • #Genes/#Species 253/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g015870.1

Descriptions

  • Description Encodes one of the WPP domain-interacting proteins (WIT1/AT5G11390, WIT2/AT1G68910) required for RanGAP nuclear envelope association in root tip cells. Ran GTPase plays essential roles in multiple cellular processes, including nucleocytoplasmic transport, spindle formation, and postmitotic nuclear envelope reassembly. The cytoplasmic Ran GTPase activating protein RanGAP is critical to establish a functional RanGTP/RanGDP gradient across the nuclear envelope and is associated with the outer surface of the nuclear envelope in metazoan and higher plant cells. Arabidopsis thaliana RanGAP association with the root tip nuclear envelope requires a family of likely plant-specific nucleoporins combining coiled-coil and transmembrane domains (CC-TMD) and WPP domain-interacting proteins (WIPs). WIT1 and WIT2 have been identified as a second family of CC-TMD proteins, structurally similar, yet clearly distinct from the WIP family, that is required for RanGAP nuclear envelop association in root tip cells. | WPP domain-interacting protein 1 (WIT1) | BEST Arabidopsis thaliana protein match is: WPP domain-interacting protein 2
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G11390

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005635
ISO
PLAZA Integrative Orthologynuclear envelope AT5G11390

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR040060 WPP domain-interacting tail-anchored protein 1
IPR039976 WPP domain-interacting tail-anchored protein
Mapman id Description
20.4.2.2 Cytoskeleton organisation.nuclear dynamics.nuclear movement.myosin-SUN-WIP adaptor (WIT)