Gene: Sopen02g009550

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g009550
  • Transcript Identifier Sopen02g009550.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 28678050-28682552 : negative

Gene Family Information

  • ID HOM05D000776
  • #Genes/#Species 759/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g009550.1

Descriptions

  • Description encodes a type-II membrane protein that catalyzes 4-epimerization of UDP-D-Xylose to UDP-L-Arabinose in vitro, the nucleotide sugar used by glycosyltransferases in the arabinosylation of cell wall polysaccharides and wall-resident proteoglycans. | MURUS 4 (MUR4) | FUNCTIONS IN: UDP-arabinose 4-epimerase activity, catalytic activity | INVOLVED IN: plant-type cell wall biogenesis, arabinose biosynthetic process, nucleotide-sugar metabolic process | LOCATED IN: Golgi apparatus | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase , NAD(P)-binding domain , UDP-glucose 4-epimerase | BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006012
IEA
InterProgalactose metabolic process
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT2G34850
GO:0019567
ISO
PLAZA Integrative Orthologyarabinose biosynthetic process AT1G30620
GO:0048868
ISO
PLAZA Integrative Orthologypollen tube development AT2G34850
GO:0009832
ISO
PLAZA Integrative Orthologyplant-type cell wall biogenesis AT1G30620

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003978
IEA
InterProUDP-glucose 4-epimerase activity
GO:0050373
ISO
PLAZA Integrative OrthologyUDP-arabinose 4-epimerase activity AT1G30620

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT1G30620

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005886 UDP-glucose 4-epimerase
IPR036291 NAD(P)-binding domain superfamily
IPR016040 NAD(P)-binding domain
Mapman id Description
3.13.7.1 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-arabinose biosynthesis.UDP-D-xylose 4-epimerase