Gene: Sopen02g006760

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g006760
  • Transcript Identifier Sopen02g006760.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 18600164-18610043 : negative

Gene Family Information

  • ID HOM05D000408
  • #Genes/#Species 1239/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g006760.1

Descriptions

  • Description ADP-ribosylation factor GTPase-activating protein containing zinc finger and C2 domains and a novel PI-3-P-binding protein region. Binds PI-3-P. Highest expression levels in flowering tissue, rosettes and roots. A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. | ZAC | FUNCTIONS IN: phospholipid binding, ARF GTPase activator activity | INVOLVED IN: intracellular protein transport | LOCATED IN: Golgi apparatus, plasma membrane, vacuole, membrane | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein , C2 membrane targeting protein , C2 calcium/lipid-binding domain, CaLB , C2 calcium-dependent membrane targeting | BEST Arabidopsis thaliana protein match is: ARF-GAP domain 13
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT4G05330
GO:0006886
ISO
PLAZA Integrative Orthologyintracellular protein transport AT4G21160

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005096
IEA
InterProGTPase activator activity
GO:0005543
IEA
InterProphospholipid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
ISO
PLAZA Integrative Orthologymembrane AT4G21160
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT4G21160
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT4G21160
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G21160

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035892 C2 domain superfamily
IPR001164 Arf GTPase activating protein
IPR044518 ADP-ribosylation factor GTPase-activating protein AGD11/12/13
IPR000008 C2 domain
IPR038508 ArfGAP domain superfamily
IPR037278 ARFGAP/RecO-like zinc finger
Mapman id Description
22.3.2.3.3 Vesicle trafficking.post-Golgi trafficking.coat protein recruiting.ARF-GTPase activation.class III ARF-GAP protein