Gene: Sopen02g006080

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g006080
  • Transcript Identifier Sopen02g006080.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 16817567-16824637 : negative

Gene Family Information

  • ID HOM05D001274
  • #Genes/#Species 492/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g006080.1

Descriptions

  • Description Eukaryotic translation initiation factor 4E-1 (eIF4E-1) (eIF-4E-1) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) (eIF-4F p26 subunit) - Oryza sativa (Rice), eIF4E protein. The cum1 mutation affects the local spreading of CMV within the inoculated leaf, delaying accumulation of cucumber mosaic virus coat protein. | eukaryotic translation initiation factor 4E (EIF4E) | CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 4E (eIF-4E) , Eukaryotic translation initiation factor 4E (eIF-4E), conserved site | BEST Arabidopsis thaliana protein match is: Eukaryotic initiation factor 4E protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006413
IEA
InterProtranslational initiation
GO:0009753
ISO
PLAZA Integrative Orthologyresponse to jasmonic acid Zm00001eb137550
GO:0009751
ISO
PLAZA Integrative Orthologyresponse to salicylic acid Zm00001eb137550
GO:0009615
ISO
PLAZA Integrative Orthologyresponse to virus AT4G18040
GO:0009723
ISO
PLAZA Integrative Orthologyresponse to ethylene Zm00001eb137550
GO:0051607
ISO
PLAZA Integrative Orthologydefense response to virus Solyc02g021550.3
GO:0034059
ISO
PLAZA Integrative Orthologyresponse to anoxia Zm00001eb137550

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0003743
IEA
InterProtranslation initiation factor activity
GO:0000339
ISO
PLAZA Integrative OrthologyRNA cap binding AT4G18040
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Solyc02g021550.3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010494
ISO
PLAZA Integrative Orthologycytoplasmic stress granule AT4G18040
GO:0000932
ISO
PLAZA Integrative OrthologyP-body AT4G18040
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT4G18040
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G18040
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G18040

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023398 Translation Initiation factor eIF- 4e-like
IPR001040 Translation Initiation factor eIF- 4e
Mapman id Description
17.4.2.3.1 Protein biosynthesis.translation initiation.mRNA loading.eIF4F mRNA unwinding complex.component eIF4E