Gene: Sopen01g053600

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g053600
  • Transcript Identifier Sopen01g053600.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 108623245-108627860 : positive

Gene Family Information

  • ID HOM05D000441
  • #Genes/#Species 1176/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g053600.1

Descriptions

  • Description Rac-like GTP-binding protein 5 (OsRac5) (GTPase protein RacD) - Oryza sativa (Rice), A member of ROP GTPase gene family | Encodes a Rho-like GTP binding protein. | RAC-like 3 (RAC3) | FUNCTIONS IN: GTP binding, GTPase activity | INVOLVED IN: protein transport, small GTPase mediated signal transduction | LOCATED IN: in 6 components | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ras GTPase , Small GTP-binding protein , Ras small GTPase, Rab type , Ras , Ras small GTPase, Ras type , Small GTPase, Rho type | BEST Arabidopsis thaliana protein match is: RAC-like GTP binding protein 5 .
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007264
IEA
InterProsmall GTPase mediated signal transduction
GO:0009958
ISO
PLAZA Integrative Orthologypositive gravitropism AT4G35020
GO:0010928
ISO
PLAZA Integrative Orthologyregulation of auxin mediated signaling pathway AT4G35020
GO:0048767
ISO
PLAZA Integrative Orthologyroot hair elongation AT4G35020
GO:0048766
ISO
PLAZA Integrative Orthologyroot hair initiation AT4G35020

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003924
IEA
InterProGTPase activity
GO:0005525
IEA
InterProGTP binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G35020
GO:0019003
ISO
PLAZA Integrative OrthologyGDP binding AT4G35020

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G35020
GO:0030427
ISO
PLAZA Integrative Orthologysite of polarized growth AT4G35020
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G35020
GO:0005819
ISO
PLAZA Integrative Orthologyspindle AT4G35020
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT4G35020
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G35020

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001806 Small GTPase
IPR005225 Small GTP-binding protein domain
IPR003578 Small GTPase Rho
Mapman id Description
27.4.1 Multi-process regulation.Rop-GTPase regulatory system.small GTPase (ROP)