Gene: Sopen01g052290

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g052290
  • Transcript Identifier Sopen01g052290.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 107746358-107751588 : negative

Gene Family Information

  • ID HOM05D000361
  • #Genes/#Species 1321/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g052290.1

Descriptions

  • Description MINICHROMOSOME MAINTENANCE 4 (MCM4) | FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding | INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication | LOCATED IN: nuclear chromatin | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 16 growth stages | CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like , Nucleic acid-binding, OB-fold , ATPase, AAA type, core , DNA-dependent ATPase MCM , DNA-dependent ATPase MCM, conserved site , MCM protein 4 | BEST Arabidopsis thaliana protein match is: minichromosome maintenance (MCM2/3/5) family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032508
IEA
InterProDNA duplex unwinding
GO:0006270
IEA
InterProDNA replication initiation
GO:0009790
ISO
PLAZA Integrative Orthologyembryo development AT2G16440
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT2G16440
GO:0006268
ISO
PLAZA Integrative OrthologyDNA unwinding involved in DNA replication AT2G16440

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0005524
IEA
InterProATP binding
GO:0003678
IEA
InterProDNA helicase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G16440

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042555
IEA
InterProMCM complex
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G16440
GO:0000347
ISO
PLAZA Integrative OrthologyTHO complex AT2G16440
GO:0000785
ISO
PLAZA Integrative Orthologychromatin AT2G16440

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001208 MCM domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR031327 Mini-chromosome maintenance protein
IPR012340 Nucleic acid-binding, OB-fold
IPR003593 AAA+ ATPase domain
IPR008047 Mini-chromosome maintenance complex protein 4
IPR027925 MCM N-terminal domain
IPR041562 MCM, AAA-lid domain
IPR033762 MCM OB domain
Mapman id Description
13.2.1.2.3 Cell cycle organisation.DNA replication.preinitiation.MCM replicative DNA helicase complex.component MCM4