Gene: Sopen01g051750
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen01g051750
- Transcript Identifier Sopen01g051750.1
- Gene Type Coding gene
- Location Spenn-ch01 : 107283788-107289099 : negative
Gene Family Information
- ID HOM05D003825
- #Genes/#Species 181/96
- Phylogenetic origin
- ID ORTHO05D004491
- #Genes/#Species 179/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen01g051750.1
Descriptions
- Description Guanine nucleotide-binding protein subunit beta - Solanum tuberosum (Potato), Encodes the heterotrimeric G-protein beta subunit and is involved in organ shape. A significant fraction of the protein is found in the ER. Mutants carrying null alleles express similar fruit phenotypes, as seen in er plants, but differ from er in that the stem is only slightly shorter than that in the wild type, the pedicel is slightly longer than that in the wild type, and the leaves are rounder than those in er mutants. Gene is expressed in all tissues examined, with highest expression level found in siliques. It is involved in resistance to Plectosphaerella cucumerina. The predicted protein has two DWD motifs. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase | GTP binding protein beta 1 (AGB1) | FUNCTIONS IN: protein binding, GTPase activity, nucleotide binding | INVOLVED IN: in 11 processes | LOCATED IN: endoplasmic reticulum, plasma membrane, CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , WD40 repeat, conserved site , Guanine nucleotide-binding protein, beta subunit , WD40 repeat , G-protein, beta subunit , G-protein beta WD-40 repeat, region , WD40 repeat-like-containing domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:1905392 | ISO | PLAZA Integrative Orthology | plant organ morphogenesis | AT4G34460 |
GO:0050832 | ISO | PLAZA Integrative Orthology | defense response to fungus | AT4G34460 |
GO:0010118 | ISO | PLAZA Integrative Orthology | stomatal movement | AT4G34460 |
GO:0030968 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum unfolded protein response | AT4G34460 |
GO:0072593 | ISO | PLAZA Integrative Orthology | reactive oxygen species metabolic process | AT4G34460 |
GO:0048364 | ISO | PLAZA Integrative Orthology | root development | AT4G34460 |
GO:0048527 | ISO | PLAZA Integrative Orthology | lateral root development | AT4G34460 |
GO:0009723 | ISO | PLAZA Integrative Orthology | response to ethylene | AT4G34460 |
GO:0009845 | ISO | PLAZA Integrative Orthology | seed germination | AT4G34460 |
GO:0009867 | ISO | PLAZA Integrative Orthology | jasmonic acid mediated signaling pathway | AT4G34460 |
GO:0009991 | ISO | PLAZA Integrative Orthology | response to extracellular stimulus | AT4G34460 |
GO:0007186 | ISO | PLAZA Integrative Orthology | G protein-coupled receptor signaling pathway | Os03g0669200 |
GO:0010154 | ISO | PLAZA Integrative Orthology | fruit development | AT4G34460 |
GO:2000280 | ISO | PLAZA Integrative Orthology | regulation of root development | AT4G34460 |
GO:0007165 | IEA | InterPro | signal transduction |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0080008 | ISO | PLAZA Integrative Orthology | Cul4-RING E3 ubiquitin ligase complex | AT4G34460 |
GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT4G34460 |
GO:0005834 | ISO | PLAZA Integrative Orthology | heterotrimeric G-protein complex | AT4G34460 |
GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT4G34460 |
GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT4G34460 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
27.9.2.3 | Multi-process regulation.G-protein-dependent signalling.heterotrimeric G-protein complex.component beta |