Gene: Sopen01g051750

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g051750
  • Transcript Identifier Sopen01g051750.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 107283788-107289099 : negative

Gene Family Information

  • ID HOM05D003825
  • #Genes/#Species 181/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g051750.1

Descriptions

  • Description Guanine nucleotide-binding protein subunit beta - Solanum tuberosum (Potato), Encodes the heterotrimeric G-protein beta subunit and is involved in organ shape. A significant fraction of the protein is found in the ER. Mutants carrying null alleles express similar fruit phenotypes, as seen in er plants, but differ from er in that the stem is only slightly shorter than that in the wild type, the pedicel is slightly longer than that in the wild type, and the leaves are rounder than those in er mutants. Gene is expressed in all tissues examined, with highest expression level found in siliques. It is involved in resistance to Plectosphaerella cucumerina. The predicted protein has two DWD motifs. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase | GTP binding protein beta 1 (AGB1) | FUNCTIONS IN: protein binding, GTPase activity, nucleotide binding | INVOLVED IN: in 11 processes | LOCATED IN: endoplasmic reticulum, plasma membrane, CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , WD40 repeat, conserved site , Guanine nucleotide-binding protein, beta subunit , WD40 repeat , G-protein, beta subunit , G-protein beta WD-40 repeat, region , WD40 repeat-like-containing domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1905392
ISO
PLAZA Integrative Orthologyplant organ morphogenesis AT4G34460
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT4G34460
GO:0010118
ISO
PLAZA Integrative Orthologystomatal movement AT4G34460
GO:0030968
ISO
PLAZA Integrative Orthologyendoplasmic reticulum unfolded protein response AT4G34460
GO:0072593
ISO
PLAZA Integrative Orthologyreactive oxygen species metabolic process AT4G34460
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT4G34460
GO:0048527
ISO
PLAZA Integrative Orthologylateral root development AT4G34460
GO:0009723
ISO
PLAZA Integrative Orthologyresponse to ethylene AT4G34460
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT4G34460
GO:0009867
ISO
PLAZA Integrative Orthologyjasmonic acid mediated signaling pathway AT4G34460
GO:0009991
ISO
PLAZA Integrative Orthologyresponse to extracellular stimulus AT4G34460
GO:0007186
ISO
PLAZA Integrative OrthologyG protein-coupled receptor signaling pathway Os03g0669200
GO:0010154
ISO
PLAZA Integrative Orthologyfruit development AT4G34460
GO:2000280
ISO
PLAZA Integrative Orthologyregulation of root development AT4G34460
GO:0007165
IEA
InterProsignal transduction

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080008
ISO
PLAZA Integrative OrthologyCul4-RING E3 ubiquitin ligase complex AT4G34460
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G34460
GO:0005834
ISO
PLAZA Integrative Orthologyheterotrimeric G-protein complex AT4G34460
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G34460
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT4G34460

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR020472 G-protein beta WD-40 repeat
IPR016346 Guanine nucleotide-binding protein, beta subunit
IPR001632 G-protein, beta subunit
IPR001680 WD40 repeat
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
27.9.2.3 Multi-process regulation.G-protein-dependent signalling.heterotrimeric G-protein complex.component beta