Gene: Sopen01g044020

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g044020
  • Transcript Identifier Sopen01g044020.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 100988532-100992698 : negative

Gene Family Information

  • ID HOM05D000779
  • #Genes/#Species 759/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g044020.1

Descriptions

  • Description A member of class I knotted1-like homeobox gene family (together with KNAT1). Similar to the knotted1 (kn1) homeobox gene of maize. KNAT2 acts synergistically with cytokinins and antagonistically with ethylene based on ectopic expression studies in different mutant backgrounds and hormone treatments. In addition, KNAT2 is negatively regulated by AS and YABBY genes. KNAT2 is strongly expressed in the shoot apex of seedlings, while in mature plants the gene is primarily expressed in flowers and inflorescence stems. | KNOTTED-like from Arabidopsis thaliana 2 (KNAT2) | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: response to ethylene stimulus, cytokinin mediated signaling pathway, specification of carpel identity | LOCATED IN: nucleus | EXPRESSED IN: 16 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: KNOX2 , ELK , Homeobox , Homeobox, conserved site , KNOX1 , Homeodomain-like , Homeodomain-related | BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 6
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005540 KNOX1
IPR009057 Homeobox-like domain superfamily
IPR005541 KNOX2
IPR008422 Homeobox KN domain
IPR005539 ELK domain
IPR001356 Homeobox domain
Mapman id Description
15.5.3.4 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (KNOX)