Gene: Sopen01g041400

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g041400
  • Transcript Identifier Sopen01g041400.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 98861890-98862807 : positive

Gene Family Information

  • ID HOM05D005899
  • #Genes/#Species 133/84
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g041400.1

Descriptions

  • Description encodes a novel protein involved in DNA repair from UV damage. Isolated by functional complementation of E. coli UV-sensitive mutants (UVR genes). | DNA-DAMAGE-REPAIR/TOLERATION 2 (DRT102) | INVOLVED IN: response to UV, photoreactive repair, response to cold | LOCATED IN: nucleus, cytoplasm | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribose/galactose isomerase , DNA-damage-repair/toleration protein, DRT102 , Cupin 2, conserved barrel , Cupin, RmlC-type , RmlC-like jelly roll fold
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT3G04880
GO:0000719
ISO
PLAZA Integrative Orthologyphotoreactive repair AT3G04880
GO:0009411
ISO
PLAZA Integrative Orthologyresponse to UV AT3G04880

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016853
IEA
InterProisomerase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G04880
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G04880
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G04880

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012100 DNA-damage-repair/toleration protein, DRT102
IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily
IPR011051 RmlC-like cupin domain superfamily
IPR013096 Cupin 2, conserved barrel
IPR014710 RmlC-like jelly roll fold
IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family
Mapman id Description
35.1 not assigned.annotated