Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g041400 Solanum pennellii HOM05D005899 ORTHO05D007445 1.4e-178 629.4 306 100.0
Solyc01g097800.3 Solanum lycopersicum HOM05D005899 ORTHO05D007445 1.4e-173 612.8 305 97.4
PGSC0003DMG400022509 Solanum tuberosum HOM05D005899 ORTHO05D007445 1.4e-173 612.8 306 97.1
Nitab4.5_0002361g0040 Nicotiana tabacum HOM05D005899 ORTHO05D007445 6.7e-152 540.8 313 84.7
Dinv11553 Davidia involucrata HOM05D005899 ORTHO05D007445 2.4e-133 479.2 302 75.5
CAN.G134.162 Capsicum annuum HOM05D005899 ORTHO05D007445 3.1e-133 478.8 314 78.0
TAR362G0589 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.2e-127 460.3 300 72.3
Oeu064565.1 Olea europaea HOM05D005899 ORTHO05D007445 5.7e-127 458.0 318 70.1
CSS0047717 Camellia sinensis var. sinensis HOM05D005899 ORTHO05D007445 7.5e-127 457.6 302 72.5
Actinidia05763 Actinidia chinensis HOM05D005899 ORTHO05D007445 2.2e-126 456.1 302 73.8
DCAR_006615 Daucus carota HOM05D005899 ORTHO05D007445 1.8e-125 453.0 303 71.3
Migut.N00303 Erythranthe guttata HOM05D005899 ORTHO05D007445 9.2e-125 450.7 306 72.9
Cc02_g31760 Coffea canephora HOM05D005899 ORTHO05D007445 1.6e-124 449.9 307 71.7
Oeu044665.1 Olea europaea HOM05D005899 ORTHO05D007445 5.0e-123 444.9 320 69.4
Prupe.6G339900 Prunus persica HOM05D005899 ORTHO05D007445 9.5e-122 440.7 308 68.5
Manes.09G155900 Manihot esculenta HOM05D005899 ORTHO05D007445 2.8e-121 439.1 312 68.3
Lj7P487T33 Lonicera japonica HOM05D005899 ORTHO05D007445 6.1e-121 438.0 301 70.1
SGA_v2.0_scaffold517G52669 Striga asiatica HOM05D005899 ORTHO05D007445 3.1e-120 435.6 296 70.9
QL03p024530 Quercus lobata HOM05D005899 ORTHO05D007445 5.2e-120 434.9 309 66.7
PSO761G0524 Papaver somniferum HOM05D005899 ORTHO05D007445 1.5e-119 433.3 300 67.0
Duzib177G0382 Durio zibethinus HOM05D005899 ORTHO05D007445 2.2e-118 429.5 297 66.3
CANSAT54G2589 Cannabis sativa HOM05D005899 ORTHO05D007445 3.7e-118 428.7 306 67.3
Duzib128G1862 Durio zibethinus HOM05D005899 ORTHO05D007445 4.9e-118 428.3 307 66.1
FAN14G1139 Fragaria x ananassa HOM05D005899 ORTHO05D007445 8.3e-118 427.6 303 67.3
FvH4_6g03430 Fragaria vesca HOM05D005899 ORTHO05D007445 1.1e-117 427.2 307 66.1
Gorai.007G285000 Gossypium raimondii HOM05D005899 ORTHO05D007445 1.4e-117 426.8 306 65.0
vmacro14199 Vaccinium macrocarpon HOM05D005899 ORTHO05D007445 2.4e-117 426.0 320 66.9
CiPaw.07G006200 Carya illinoinensis HOM05D005899 ORTHO05D007445 7.0e-117 424.5 304 66.4
RcHm_v2.0_Chr3g0451931 Rosa chinensis HOM05D005899 ORTHO05D007445 7.0e-117 424.5 302 66.2
Cfa006459 Carpinus fangiana HOM05D005899 ORTHO05D007445 9.2e-117 424.1 303 66.3
Rhsim07G0131800 Rhododendron simsii HOM05D005899 ORTHO05D007445 1.2e-116 423.7 313 68.4
Thecc.05G288500 Theobroma cacao HOM05D005899 ORTHO05D007445 1.6e-116 423.3 296 66.9
Gohir.A11G255200 Gossypium hirsutum HOM05D005899 ORTHO05D007445 2.0e-116 422.9 306 64.4
Gohir.D11G264900 Gossypium hirsutum HOM05D005899 ORTHO05D007445 2.7e-116 422.5 306 64.7
arahy.Tifrunner.gnm1.ann1.41KAT0 Arachis hypogaea HOM05D005899 ORTHO05D007445 3.0e-115 419.1 298 66.1
TWI56G0091 Tripterygium wilfordii HOM05D005899 ORTHO05D007445 3.0e-115 419.1 313 64.9
MD12G1237200 Malus domestica HOM05D005899 ORTHO05D007445 3.3e-114 415.6 307 65.5
Potri.005G050600 Populus trichocarpa HOM05D005899 ORTHO05D007445 5.6e-114 414.8 308 65.9
FAN02G1821 Fragaria x ananassa HOM05D005899 ORTHO05D007445 7.3e-114 414.5 293 67.2
Lsat_1_v5_gn_6_53000 Lactuca sativa HOM05D005899 ORTHO05D007445 7.3e-114 414.5 299 64.9
ECA233G4289 Erigeron canadensis HOM05D005899 ORTHO05D007445 3.6e-113 412.1 304 64.1
MBI01_g13083_MAGBIO Magnolia biondii HOM05D005899 ORTHO05D007445 3.6e-113 412.1 299 66.2
Sabra15G0068500 Salix brachista HOM05D005899 ORTHO05D007445 4.7e-113 411.8 307 65.8
AUR62000983 Chenopodium quinoa HOM05D005899 ORTHO05D007445 2.3e-112 409.5 300 65.0
Medtr7g114750 Medicago truncatula HOM05D005899 ORTHO05D007445 5.2e-112 408.3 302 64.2
Ciclev10001942m.g Citrus clementina HOM05D005899 ORTHO05D007445 6.8e-112 407.9 304 64.5
Cpa.g.sc117.66 Carica papaya HOM05D005899 ORTHO05D007445 8.9e-112 407.5 300 67.3
EL10Ac4g09173 Beta vulgaris HOM05D005899 ORTHO05D007445 1.2e-111 407.1 307 63.2
Ciclev10001941m.g Citrus clementina HOM05D005899 ORTHO05D007445 2.6e-111 406.0 304 64.5
TPR.G6971 Trifolium pratense HOM05D005899 ORTHO05D007445 2.6e-111 406.0 293 64.8
CDE05G2514 Ceratophyllum demersum HOM05D005899 ORTHO05D007445 2.2e-110 402.9 289 65.4
SEGI_33796 Sequoiadendron giganteum HOM05D005899 ORTHO05D007445 3.7e-110 402.1 294 64.3
ATR0681G168 Amborella trichopoda HOM05D005899 ORTHO05D007445 6.4e-110 401.4 302 64.6
Ca_09408_v3 Cicer arietinum L. HOM05D005899 ORTHO05D007445 6.4e-110 401.4 298 64.1
AT3G04880 Arabidopsis thaliana HOM05D005899 ORTHO05D007445 1.4e-109 400.2 309 62.8
Psat0s62g0080 Pisum sativum HOM05D005899 ORTHO05D007445 5.4e-109 398.3 302 61.9
Aa31LG5G15270 Aethionema arabicum HOM05D005899 ORTHO05D007445 9.2e-109 397.5 310 62.3
BraA05t22981Z Brassica rapa HOM05D005899 ORTHO05D007445 9.2e-109 397.5 307 63.5
VMungo0540G1799 Vigna mungo HOM05D005899 ORTHO05D007445 1.6e-108 396.7 302 64.2
C05p62440 Brassica napus HOM05D005899 ORTHO05D007445 2.1e-108 396.4 307 62.9
Glyma.19G243000 Glycine max HOM05D005899 ORTHO05D007445 2.1e-108 396.4 302 63.9
HanXRQChr02g0057281 Helianthus annuus HOM05D005899 ORTHO05D007445 2.1e-108 396.4 301 62.8
CARHR079150 Cardamine hirsuta HOM05D005899 ORTHO05D007445 3.5e-108 395.6 302 63.6
Lalb_Chr15g0076871 Lupinus albus HOM05D005899 ORTHO05D007445 3.5e-108 395.6 303 61.7
PGR083G2155 Punica granatum HOM05D005899 ORTHO05D007445 4.6e-108 395.2 294 64.3
BcaB03g11648 Brassica carinata HOM05D005899 ORTHO05D007445 7.8e-108 394.4 298 62.8
A05p42720 Brassica napus HOM05D005899 ORTHO05D007445 7.8e-108 394.4 308 62.7
Lj1g0012490 Lotus japonicus HOM05D005899 ORTHO05D007445 1.3e-107 393.7 292 65.1
FAN05G2237 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.7e-107 393.3 299 64.5
BolC5t34897H Brassica oleracea HOM05D005899 ORTHO05D007445 3.0e-107 392.5 307 62.5
HPP92_023141 Vanilla planifolia HOM05D005899 ORTHO05D007445 3.0e-107 392.5 296 63.9
Phvul.006G099800 Phaseolus vulgaris HOM05D005899 ORTHO05D007445 8.6e-107 391.0 302 63.6
SHI18352 Sapria himalayana HOM05D005899 ORTHO05D007445 3.3e-106 389.0 307 62.9
THA.LOC104802822 Tarenaya hassleriana HOM05D005899 ORTHO05D007445 1.6e-105 386.7 300 62.7
Sed0018425 Sechium edule HOM05D005899 ORTHO05D007445 2.1e-105 386.3 296 62.2
Eucgr.L01763 Eucalyptus grandis HOM05D005899 ORTHO05D007445 3.6e-105 385.6 307 60.6
Sc13g0006240 Simmondsia chinensis HOM05D005899 ORTHO05D007445 6.2e-105 384.8 296 63.5
QL03p024564 Quercus lobata HOM05D005899 ORTHO05D007445 5.2e-104 381.7 302 62.6
Sp3g03700 Schrenkiella parvula HOM05D005899 ORTHO05D007445 4.6e-100 368.6 298 61.1
Cfa006460 Carpinus fangiana HOM05D005899 ORTHO05D007445 4.3e-98 362.1 306 60.5
Nn4g26305 Nelumbo nucifera HOM05D005899 ORTHO05D007445 6.2e-97 358.2 240 72.9
Os01g0542000 Oryza sativa ssp. japonica HOM05D005899 ORTHO05D007445 7.6e-95 351.3 308 56.5
SMO367G0143 Selaginella moellendorffii HOM05D005899 ORTHO05D007445 2.2e-94 349.7 299 56.2
Zm00001eb162780 Zea mays HOM05D005899 ORTHO05D007445 3.5e-92 342.4 298 57.0
Nitab4.5_0013433g0050 Nicotiana tabacum HOM05D005899 ORTHO05D007445 1.6e-89 333.6 192 81.8
Peaxi162Scf00404g00009 Petunia axillaris HOM05D005899 ORTHO05D007445 3.6e-89 332.4 213 77.5
Sabra15G0041400 Salix brachista HOM05D005899 ORTHO05D007445 3.1e-88 329.3 307 55.7
TPR.G8897 Trifolium pratense HOM05D005899 ORTHO05D007445 1.3e-86 323.9 260 61.5
AL3G15170 Arabidopsis lyrata HOM05D005899 ORTHO05D007445 1.7e-83 313.5 229 65.1
Atru.chr2.732 Acer truncatum HOM05D005899 ORTHO05D007445 7.3e-82 308.1 238 63.4
Atru.chr2.745 Acer truncatum HOM05D005899 ORTHO05D007445 2.8e-81 306.2 237 63.3
Pp3c6_4500 Physcomitrium patens HOM05D005899 ORTHO05D007445 6.9e-80 301.6 420 40.5
Haze_04330 Corylus avellana HOM05D005899 ORTHO05D007445 2.0e-79 300.1 275 55.3
FAN09G0887 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.1e-77 294.3 299 53.2
Actinidia36917 Actinidia chinensis HOM05D005899 ORTHO05D007445 1.2e-71 274.2 206 67.5
Atru.chr2.742 Acer truncatum HOM05D005899 ORTHO05D007445 8.4e-70 268.1 234 59.0
Eucgr.L02186 Eucalyptus grandis HOM05D005899 ORTHO05D007445 3.0e-67 259.6 306 44.8
Eucgr.B01712 Eucalyptus grandis HOM05D005899 ORTHO05D007445 5.3e-64 248.8 299 46.2
Eucgr.L02099 Eucalyptus grandis HOM05D005899 ORTHO05D007445 6.9e-64 248.4 199 60.3
unitig_744.g24569 Utricularia gibba HOM05D005899 ORTHO05D007445 1.5e-63 247.3 190 64.2
Dinv12477 Davidia involucrata HOM05D005899 ORTHO05D007445 1.0e-59 234.6 139 76.3
AUR62004985 Chenopodium quinoa HOM05D005899 ORTHO05D007445 4.3e-58 229.2 254 50.0
Eucgr.B01710 Eucalyptus grandis HOM05D005899 ORTHO05D007445 3.7e-57 226.1 298 44.3
Ah.04g162380 Amaranthus hybridus HOM05D005899 ORTHO05D007445 1.4e-56 224.2 165 61.8
AUR62004976 Chenopodium quinoa HOM05D005899 ORTHO05D007445 3.8e-54 216.1 166 62.0
BcaNung06538 Brassica carinata HOM05D005899 ORTHO05D007445 2.1e-52 210.3 167 59.9
Sabra15G0056900 Salix brachista HOM05D005899 ORTHO05D007445 2.8e-49 199.9 145 64.8
Sabra15G0057000 Salix brachista HOM05D005899 ORTHO05D007445 4.8e-49 199.1 142 66.2
Sabra15G0068600 Salix brachista HOM05D005899 ORTHO05D007445 4.8e-49 199.1 142 66.2
Medtr8g098320 Medicago truncatula HOM05D005899 ORTHO05D007445 6.9e-48 195.3 161 58.4
Carub.0003s0407 Capsella rubella HOM05D005899 ORTHO05D007445 9.1e-48 194.9 134 67.9
SGA_v2.0_scaffold31G12627 Striga asiatica HOM05D005899 ORTHO05D007445 2.5e-45 186.8 128 68.0
FAN05G4786 Fragaria x ananassa HOM05D005899 ORTHO05D007445 5.1e-43 179.1 105 76.2
Medtr7g114730 Medicago truncatula HOM05D005899 ORTHO05D007445 5.1e-43 179.1 160 54.4
FAN05G4109 Fragaria x ananassa HOM05D005899 ORTHO05D007445 2.2e-41 173.7 161 55.9
TPR.G21843 Trifolium pratense HOM05D005899 ORTHO05D007445 4.7e-36 156.0 116 67.2
Cfa006462 Carpinus fangiana HOM05D005899 ORTHO05D007445 2.0e-34 150.6 128 57.8
Carub.0003s0408 Capsella rubella HOM05D005899 ORTHO05D007445 3.2e-29 133.3 104 62.5
AUR62000980 Chenopodium quinoa HOM05D005899 ORTHO05D007445 2.2e-25 120.6 90 66.7
TAR636G1090 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.1e-21 108.2 103 55.3
TAR140G0002 Trochodendron aralioides HOM05D005899 ORTHO05D007445 9.4e-21 105.1 103 56.3
TAR623G1042 Trochodendron aralioides HOM05D005899 ORTHO05D007445 9.4e-21 105.1 103 56.3
TAR375G0990 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.1e-20 104.0 104 55.8
PRCOL_00001982 Prasinoderma coloniale HOM05D005899 ORTHO05D007445 1.0e-19 101.7 153 37.3
RcHm_v2.0_Chr7g0217791 Rosa chinensis HOM05D005899 ORTHO05D007445 4.4e-18 96.3 138 40.6
TAR625G0400 Trochodendron aralioides HOM05D005899 ORTHO05D007445 3.7e-17 93.2 88 54.5
unitig_21.g20175 Utricularia gibba HOM05D005899 ORTHO05D007445 1.3e-14 84.7 71 59.2
TAR365G0745 Trochodendron aralioides HOM05D005899 ORTHO05D007445 6.3e-09 65.9 55 58.2
TAR375G0306 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.7e-07 60.5 47 66.0
FAN06G4129 Fragaria x ananassa HOM05D005899 ORTHO05D045384 5.0e-06 56.2 68 45.6
FvH4_7g17710 Fragaria vesca HOM05D005899 ORTHO05D045384 8.6e-06 55.5 69 43.5


User provided reference genes

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