Gene: Sopen01g040990
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen01g040990
- Transcript Identifier Sopen01g040990.1
- Gene Type Coding gene
- Location Spenn-ch01 : 98542843-98552996 : negative
Gene Family Information
- ID HOM05D004252
- #Genes/#Species 167/94
- Phylogenetic origin
- ID ORTHO05D005101
- #Genes/#Species 164/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen01g040990.1
Descriptions
- Description encodes a protein with similarities to subunits of the Mediator complex, required for RNA polymerase II recruitment at target promoters in response to specific activators. Lines carrying loss of function mutations in the gene have reduced cell numbers in aerial organs. On the other hand, lines overexpressing the gene have increased number of small cells in clusters, suggesting cell division is more unsynchronized in the overexpressors. | STRUWWELPETER (SWP) | FUNCTIONS IN: RNA polymerase II transcription mediator activity | INVOLVED IN: positive regulation of transcription, positive regulation of cell proliferation | LOCATED IN: mediator complex | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med14
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006357 | IEA | InterPro | regulation of transcription by RNA polymerase II | |
GO:0009627 | ISO | PLAZA Integrative Orthology | systemic acquired resistance | AT3G04740 |
GO:0008284 | ISO | PLAZA Integrative Orthology | positive regulation of cell population proliferation | AT3G04740 |
GO:0009631 | ISO | PLAZA Integrative Orthology | cold acclimation | AT3G04740 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003712 | IEA | InterPro | transcription coregulator activity | |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G04740 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0016592 | IEA | InterPro | mediator complex | |
GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT3G04740 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR013947 | Mediator complex, subunit Med14 |
Mapman id | Description |
---|---|
15.3.4.4.3.4 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.MEDIATOR complex.tail module.component MED14 |