Gene: Sopen01g040940

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g040940
  • Transcript Identifier Sopen01g040940.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 98509756-98510455 : negative

Gene Family Information

  • ID HOM05D002072
  • #Genes/#Species 321/80
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g040940.1

Descriptions

  • Description Wound-induced protein WIN2 precursor - Solanum tuberosum (Potato), Encodes a protein similar to the antifungal chitin-binding protein hevein from rubber tree latex. mRNA levels increase in response to ethylene and turnip crinkle virus infection. | pathogenesis-related 4 (PR4) | FUNCTIONS IN: chitin binding | INVOLVED IN: in 6 processes | LOCATED IN: endomembrane system | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 10 growth stages | CONTAINS InterPro DOMAIN/s: Barwin , Glycoside hydrolase, family 19, catalytic , Barwin-related endoglucanase , Chitin-binding, type 1, conserved site , Barwin-like endoglucanase , Barwin, conserved site , Chitin-binding, type 1 | BEST Arabidopsis thaliana protein match is: basic chitinase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042742
IEA
InterProdefense response to bacterium
GO:0050832
IEA
InterProdefense response to fungus
GO:0006952
IEA
InterProdefense response
GO:0009627
ISO
PLAZA Integrative Orthologysystemic acquired resistance AT3G04720
GO:0080027
ISO
PLAZA Integrative Orthologyresponse to herbivore AT3G04720
GO:0009615
ISO
PLAZA Integrative Orthologyresponse to virus AT3G04720
GO:0009723
ISO
PLAZA Integrative Orthologyresponse to ethylene AT3G04720

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008061
IEA
InterProchitin binding
GO:0004540
IEA
InterProribonuclease activity
GO:0004568
ISO
PLAZA Integrative Orthologychitinase activity AT3G04720

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000325
ISO
PLAZA Integrative Orthologyplant-type vacuole AT3G04720

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001153 Barwin domain
IPR036861 Endochitinase-like superfamily
IPR001002 Chitin-binding, type 1
IPR036908 RlpA-like domain superfamily
IPR044301 Pathogenesis-related protein-4
Mapman id Description
35.1 not assigned.annotated