Gene: Sopen01g040550

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g040550
  • Transcript Identifier Sopen01g040550.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 98158533-98160308 : negative

Gene Family Information

  • ID HOM05D000641
  • #Genes/#Species 889/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g040550.1

Descriptions

  • Description Encodes a novel microtubule binding protein that preferentially associates with nuclear microtubules during mitosis and is essential during the mitotic and cytokinetic stages that generate the endosperm and embryo. | ENDOSPERM DEFECTIVE 1 (EDE1) | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF566 | BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF566)
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051301
ISO
PLAZA Integrative Orthologycell division AT2G44190
GO:0048316
ISO
PLAZA Integrative Orthologyseed development AT2G44190
GO:0000226
ISO
PLAZA Integrative Orthologymicrotubule cytoskeleton organization AT2G44190
GO:0009960
ISO
PLAZA Integrative Orthologyendosperm development AT2G44190
GO:0010342
ISO
PLAZA Integrative Orthologyendosperm cellularization AT2G44190

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008017
ISO
PLAZA Integrative Orthologymicrotubule binding AT2G44190

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G44190
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT2G44190
GO:0005880
ISO
PLAZA Integrative Orthologynuclear microtubule AT2G44190

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007573 QWRF family
Mapman id Description
20.1.2.2.9 Cytoskeleton organisation.microtubular network.microtubule Tubulin heterodimer formation.Augmin gamma-Tubulin Ring Complex recruiting complex.accessory component EDE1