Gene: Sopen01g040540
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen01g040540
- Transcript Identifier Sopen01g040540.1
- Gene Type Coding gene
- Location Spenn-ch01 : 98140228-98156707 : negative
Gene Family Information
- ID HOM05D003223
- #Genes/#Species 212/97
- Phylogenetic origin
- ID ORTHO05D004865
- #Genes/#Species 169/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Sopen01g040540.1
Descriptions
- Description A member of the eukaryotic type V subfamily (P5) of P-type ATPase cation pumps | MIA is most similar to the human P5 ATPase ATY2(44% identity) and to Spf1p from S. cerevisiae (41% identity). Highly abundant in the endoplasmic reticulum and small vesicles of developing pollen grains and tapetum cells. T-DNA insertional mutants of MIA suffer from imbalances in cation homeostasis and exhibit a severe reduction in fertility. Mutant microspores fail to separate from tetrads and pollen grains are fragile with an abnormal morphology and altered cell wall structure. MIA is also named PDR2 and was shown to be required for proper expression of SCARECROW (SCR), a key regulator of root patterning, and for stem-cell maintenance in Pi-deprived roots. | phosphate deficiency response 2 (PDR2) | FUNCTIONS IN: cation-transporting ATPase activity | INVOLVED IN: in 6 processes | LOCATED IN: endoplasmic reticulum, plasma membrane | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase , ATPase, P-type, unknown pump specificity (type V) , ATPase, P-type, ATPase-associated domain , ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter , ATPase, P-type phosphorylation site | BEST Arabidopsis thaliana protein match is: calcium ATPase 2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006812 | IEA | InterPro | cation transport | |
GO:0010152 | ISO | PLAZA Integrative Orthology | pollen maturation | AT5G23630 |
GO:0010073 | ISO | PLAZA Integrative Orthology | meristem maintenance | AT5G23630 |
GO:0048867 | ISO | PLAZA Integrative Orthology | stem cell fate determination | AT5G23630 |
GO:0006875 | ISO | PLAZA Integrative Orthology | cellular metal ion homeostasis | AT5G23630 |
GO:0009846 | ISO | PLAZA Integrative Orthology | pollen germination | AT5G23630 |
GO:0016036 | ISO | PLAZA Integrative Orthology | cellular response to phosphate starvation | AT5G23630 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005215 | IEA | InterPro | transporter activity | |
GO:0005524 | IEA | InterPro | ATP binding | |
GO:0016887 | IEA | InterPro | ATP hydrolysis activity | |
GO:0019829 | IEA | InterPro | ATPase-coupled cation transmembrane transporter activity | |
GO:0000166 | IEA | InterPro | nucleotide binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0016021 | IEA | InterPro | integral component of membrane | |
GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT5G23630 |
GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G23630 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR023298 | P-type ATPase, transmembrane domain superfamily |
IPR001757 | P-type ATPase |
IPR023214 | HAD superfamily |
IPR036412 | HAD-like superfamily |
IPR044492 | P-type ATPase, haloacid dehalogenase domain |
IPR006544 | P-type ATPase, subfamily V |
IPR023299 | P-type ATPase, cytoplasmic domain N |
IPR008250 | P-type ATPase, A domain superfamily |
Mapman id | Description |
---|---|
24.1.2.5.1 | Solute transport.primary active transport.P-type ATPase superfamily.P5 family.P5-type cation-transporting ATPase (MIA) |