Gene: Sopen01g040540

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g040540
  • Transcript Identifier Sopen01g040540.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 98140228-98156707 : negative

Gene Family Information

  • ID HOM05D003223
  • #Genes/#Species 212/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g040540.1

Descriptions

  • Description A member of the eukaryotic type V subfamily (P5) of P-type ATPase cation pumps | MIA is most similar to the human P5 ATPase ATY2(44% identity) and to Spf1p from S. cerevisiae (41% identity). Highly abundant in the endoplasmic reticulum and small vesicles of developing pollen grains and tapetum cells. T-DNA insertional mutants of MIA suffer from imbalances in cation homeostasis and exhibit a severe reduction in fertility. Mutant microspores fail to separate from tetrads and pollen grains are fragile with an abnormal morphology and altered cell wall structure. MIA is also named PDR2 and was shown to be required for proper expression of SCARECROW (SCR), a key regulator of root patterning, and for stem-cell maintenance in Pi-deprived roots. | phosphate deficiency response 2 (PDR2) | FUNCTIONS IN: cation-transporting ATPase activity | INVOLVED IN: in 6 processes | LOCATED IN: endoplasmic reticulum, plasma membrane | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase , ATPase, P-type, unknown pump specificity (type V) , ATPase, P-type, ATPase-associated domain , ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter , ATPase, P-type phosphorylation site | BEST Arabidopsis thaliana protein match is: calcium ATPase 2
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006812
IEA
InterProcation transport
GO:0010152
ISO
PLAZA Integrative Orthologypollen maturation AT5G23630
GO:0010073
ISO
PLAZA Integrative Orthologymeristem maintenance AT5G23630
GO:0048867
ISO
PLAZA Integrative Orthologystem cell fate determination AT5G23630
GO:0006875
ISO
PLAZA Integrative Orthologycellular metal ion homeostasis AT5G23630
GO:0009846
ISO
PLAZA Integrative Orthologypollen germination AT5G23630
GO:0016036
ISO
PLAZA Integrative Orthologycellular response to phosphate starvation AT5G23630

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005215
IEA
InterProtransporter activity
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0019829
IEA
InterProATPase-coupled cation transmembrane transporter activity
GO:0000166
IEA
InterPronucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
InterProintegral component of membrane
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT5G23630
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G23630

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023298 P-type ATPase, transmembrane domain superfamily
IPR001757 P-type ATPase
IPR023214 HAD superfamily
IPR036412 HAD-like superfamily
IPR044492 P-type ATPase, haloacid dehalogenase domain
IPR006544 P-type ATPase, subfamily V
IPR023299 P-type ATPase, cytoplasmic domain N
IPR008250 P-type ATPase, A domain superfamily
Mapman id Description
24.1.2.5.1 Solute transport.primary active transport.P-type ATPase superfamily.P5 family.P5-type cation-transporting ATPase (MIA)