Gene: Sopen01g038590

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g038590
  • Transcript Identifier Sopen01g038590.2
  • Gene Type Coding gene
  • Location Spenn-ch01 : 96476833-96480575 : negative

Gene Family Information

  • ID HOM05D000773
  • #Genes/#Species 761/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g038590.2

Descriptions

  • Description ARID/BRIGHT DNA-binding domain, ELM2 domain protein | FUNCTIONS IN: DNA binding | INVOLVED IN: biological_process unknown | LOCATED IN: intracellular | EXPRESSED IN: sperm cell, male gametophyte, cultured cell, seed, pollen tube | EXPRESSED DURING: M germinated pollen stage, E expanded cotyledon stage | CONTAINS InterPro DOMAIN/s: ELM2 , ARID/BRIGHT DNA-binding domain | BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain, ELM2 domain protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048235
ISO
PLAZA Integrative Orthologypollen sperm cell differentiation AT2G46040
GO:0010628
ISO
PLAZA Integrative Orthologypositive regulation of gene expression AT2G46040
GO:0016575
ISO
PLAZA Integrative Orthologyhistone deacetylation AT2G46040

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048555
ISO
PLAZA Integrative Orthologygenerative cell nucleus AT2G46040
GO:0000118
ISO
PLAZA Integrative Orthologyhistone deacetylase complex AT2G46040
GO:0048556
ISO
PLAZA Integrative Orthologymicrosporocyte nucleus AT2G46040

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR036431 ARID DNA-binding domain superfamily
IPR000949 ELM2 domain
IPR001606 ARID DNA-binding domain
Mapman id Description
15.5.25 RNA biosynthesis.transcriptional regulation.transcription factor (ARID)