Gene: Sopen01g038560

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g038560
  • Transcript Identifier Sopen01g038560.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 96446130-96448543 : positive

Gene Family Information

  • ID HOM05D000384
  • #Genes/#Species 1274/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g038560.1

Descriptions

  • Description Encodes a cysteine synthase isomer CysC1. The isomer is however less effective in cysteine biosynthesis. It is involved in beta-cyanoalanine biosynthesis, an intermediate of cyanide detoxification pathway. | cysteine synthase C1 (CYSC1) | CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent enzyme, beta subunit | BEST Arabidopsis thaliana protein match is: O-acetylserine (thiol) lyase isoform C ., Cysteine synthase, chloroplast precursor (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase B) (CS-B) (OAS-TL B) - Solanum tuberosum (Potato), Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006535
IEA
InterProcysteine biosynthetic process from serine
GO:0051410
ISO
PLAZA Integrative Orthologydetoxification of nitrogen compound AT3G61440
GO:0006955
ISO
PLAZA Integrative Orthologyimmune response AT3G61440
GO:0019344
ISO
PLAZA Integrative Orthologycysteine biosynthetic process AT3G61440
GO:0080147
ISO
PLAZA Integrative Orthologyroot hair cell development AT3G61440
GO:0019500
ISO
PLAZA Integrative Orthologycyanide catabolic process AT3G61440
GO:0019499
ISO
PLAZA Integrative Orthologycyanide metabolic process AT3G61440

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004124
IEA
InterProcysteine synthase activity
GO:0005507
ISO
PLAZA Integrative Orthologycopper ion binding AT3G61440
GO:0050017
ISO
PLAZA Integrative OrthologyL-3-cyanoalanine synthase activity AT3G61440

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G61440
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G61440

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001926 Pyridoxal-phosphate dependent enzyme
IPR005856 Cysteine synthase
IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme
IPR005859 Cysteine synthase CysK
Mapman id Description
50.2.5 Enzyme classification.EC_2 transferases.EC_2.5 transferase transferring alkyl or aryl group, other than methyl group