Gene: Sopen01g037440
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen01g037440
- Transcript Identifier Sopen01g037440.1
- Gene Type Coding gene
- Location Spenn-ch01 : 95519796-95521106 : positive
Gene Family Information
- ID HOM05D001121
- #Genes/#Species 549/96
- Phylogenetic origin
- ID ORTHO05D001256
- #Genes/#Species 446/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen01g037440.1
Descriptions
- Description encodes a novel protein containing mammalian death domain involved in programmed cell death. Gene is expressed in vascular system and mutants carrying dominant mutation in the gene have defective vascular patterning. Gene expression is induced specifically by wounding. | VEIN PATTERNING 1 (VEP1) | FUNCTIONS IN: binding, catalytic activity | INVOLVED IN: xylem and phloem pattern formation, response to wounding | LOCATED IN: cellular_component unknown | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain | BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010051 | ISO | PLAZA Integrative Orthology | xylem and phloem pattern formation | AT4G24220 |
| GO:0009611 | ISO | PLAZA Integrative Orthology | response to wounding | AT4G24220 |
| GO:0008202 | ISO | PLAZA Integrative Orthology | steroid metabolic process | AT4G24220 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0035671 | ISO | PLAZA Integrative Orthology | enone reductase activity | AT4G24220 |
| GO:0046983 | ISO | PLAZA Integrative Orthology | protein dimerization activity | AT4G24220 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT4G24220 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036291 | NAD(P)-binding domain superfamily |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |