Gene: AT4G24220
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G24220
- Transcript Identifier AT4G24220.1
- Gene Type Coding gene
- Location Chr4 : 12565219-12566474 : positive
Gene Family Information
- ID HOM05D001121
- #Genes/#Species 549/96
- Phylogenetic origin
- ID ORTHO05D001256
- #Genes/#Species 446/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT4G24220.1
- symbol VEP1
- Alias 5[beta]-StR,%26#916%3B4,5-steroid-5[beta]-reductase,AWI31
- full_name VEIN PATTERNING 1
- uniprot Q9STX2
Descriptions
- Description NAD(P)-binding Rossmann-fold superfamily protein
- Computational description VEIN PATTERNING 1 (VEP1); FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: xylem and phloem pattern formation, response to wounding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G58750.1); Has 706 Blast hits to 702 proteins in 199 species: Archae - 0; Bacteria - 237; Metazoa - 0; Fungi - 166; Plants - 221; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009611 | IEP | Gene Ontology | response to wounding | 1 |
| GO:0010051 | IMP | Gene Ontology | xylem and phloem pattern formation | 1 |
| GO:0008202 | IDA | Gene Ontology | steroid metabolic process | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0047787 | IEA | Gene Ontology | delta4-3-oxosteroid 5beta-reductase activity | |
| GO:0035671 | IDA | Gene Ontology | enone reductase activity | 2 |
| GO:0046983 | IPI | Gene Ontology | protein dimerization activity | 3 |
| GO:0016491 | IEA | GOA Database | oxidoreductase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | IDA | GOA Database | cytosol | |
| GO:0005829 | HDA | Gene Ontology | cytosol | 4 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036291 | NAD(P)-binding domain superfamily |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |