Gene: Sopen01g034890
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen01g034890
- Transcript Identifier Sopen01g034890.2
- Gene Type Coding gene
- Location Spenn-ch01 : 92814189-92819341 : negative
Gene Family Information
- ID HOM05D000042
- #Genes/#Species 4894/100
- Phylogenetic origin
- ID ORTHO05D000028
- #Genes/#Species 3637/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen01g034890.2
Descriptions
- Description Agamous-like MADS-box protein AGL15 - Brassica napus (Rape), AGL15 (AGAMOUS-Like 15) is a member of the MADS domain family of regulatory factors. Although AGL15 is preferentially expressed during embryogenesis, AGL15 is also expressed in leaf primordia, shoot apical meristems and young floral buds, suggesting that AGL15 may play a role during post-germinative development. Transgenic plants that ectopically express AGL15 show delays in the transition to flowering, perianth abscission and senescence and fruit and seed maturation. Role in embryogenesis and gibberellic acid catabolism. Targets B3 domain transcription factors that are key regulators of embryogenesis. | AGAMOUS-like 15 (AGL15) | CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box , Transcription factor, K-box | BEST Arabidopsis thaliana protein match is: AGAMOUS-like 18
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0045487 | ISO | PLAZA Integrative Orthology | gibberellin catabolic process | AT5G13790 |
GO:0010047 | ISO | PLAZA Integrative Orthology | fruit dehiscence | AT5G13790 |
GO:0010227 | ISO | PLAZA Integrative Orthology | floral organ abscission | AT5G13790 |
GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT5G13790 |
GO:0071365 | ISO | PLAZA Integrative Orthology | cellular response to auxin stimulus | AT5G13790 |
GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT5G13790 |
GO:0048577 | ISO | PLAZA Integrative Orthology | negative regulation of short-day photoperiodism, flowering | AT3G57390 |
GO:0010629 | ISO | PLAZA Integrative Orthology | negative regulation of gene expression | AT5G13790 |
GO:0009910 | ISO | PLAZA Integrative Orthology | negative regulation of flower development | AT3G57390 |
GO:0060862 | ISO | PLAZA Integrative Orthology | negative regulation of floral organ abscission | AT5G13790 |
GO:0060867 | ISO | PLAZA Integrative Orthology | fruit abscission | AT5G13790 |
GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT3G57390 |
GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT5G13790 |
GO:2000692 | ISO | PLAZA Integrative Orthology | negative regulation of seed maturation | AT5G13790 |
GO:0010262 | ISO | PLAZA Integrative Orthology | somatic embryogenesis | AT5G13790 |
GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
GO:0045944 | IEA | InterPro | positive regulation of transcription by RNA polymerase II |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0140110 | ISO | PLAZA Integrative Orthology | transcription regulator activity | AT5G13790 |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G57390 |
GO:0043565 | ISO | PLAZA Integrative Orthology | sequence-specific DNA binding | AT5G13790 |
GO:0000977 | IEA | InterPro | RNA polymerase II transcription regulatory region sequence-specific DNA binding | |
GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT3G57390 |
GO:0042803 | ISO | PLAZA Integrative Orthology | protein homodimerization activity | AT5G13790 |
GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
GO:0046983 | IEA | InterPro | protein dimerization activity | |
GO:0003677 | IEA | InterPro | DNA binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT5G13790 |
GO:0005634 | IEA | InterPro | nucleus |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
15.5.14 | RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL) |