Gene: Sopen01g028840
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen01g028840
- Transcript Identifier Sopen01g028840.1
- Gene Type Coding gene
- Location Spenn-ch01 : 85349249-85349665 : positive
Gene Family Information
- ID HOM05D000297
- #Genes/#Species 1509/99
- Phylogenetic origin
- ID ORTHO05D000193
- #Genes/#Species 1419/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen01g028840.1
Descriptions
- Description nuclear factor Y, subunit B5 (NF-YB5) | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent | LOCATED IN: nucleus, intracellular | EXPRESSED IN: sepal, male gametophyte, root, carpel | EXPRESSED DURING: 4 anthesis | CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase , Transcription factor CBF/NF-Y/archaeal histone , Histone-fold , Transcription factor, NFYB/HAP3, conserved site | BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B3
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0001228 | IEA | InterPro | DNA-binding transcription activator activity, RNA polymerase II-specific | |
| GO:0046982 | IEA | InterPro | protein heterodimerization activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G47810 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016602 | IEA | InterPro | CCAAT-binding factor complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.49.2 | RNA biosynthesis.transcriptional regulation.NF-Y transcription factor complex.component NF-YB |