Gene: Sopen01g026980

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g026980
  • Transcript Identifier Sopen01g026980.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 81687110-81691774 : negative

Gene Family Information

  • ID HOM05D004772
  • #Genes/#Species 154/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g026980.1

Descriptions

  • Description Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3 UTR of target mRNA transcripts. | pumilio 24 (PUM24) | FUNCTIONS IN: RNA binding, binding | LOCATED IN: nucleolus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat , Armadillo-like helical , Armadillo-type fold | BEST Arabidopsis thaliana protein match is: pumilio 5
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT3G16810

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G16810

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR011989 Armadillo-like helical
IPR001313 Pumilio RNA-binding repeat
IPR012959 CPL domain
IPR016024 Armadillo-type fold
IPR040059 Pumilio homologue 3
Mapman id Description
17.1.1.9.3 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.ITS2 rRNA removal.rRNA processing factor (APUM24)