Gene: Sopen01g026170
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen01g026170
- Transcript Identifier Sopen01g026170.1
- Gene Type Coding gene
- Location Spenn-ch01 : 79563677-79566147 : negative
Gene Family Information
- ID HOM05D000020
- #Genes/#Species 6649/98
- Phylogenetic origin
- ID ORTHO05D000282
- #Genes/#Species 1199/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen01g026170.1
Descriptions
- Description Glucan endo-1,3-beta-glucosidase, basic isoform 2 precursor (EC 3.2.1.39) ((1- 3)-beta-glucan endohydrolase) ((1- 3)-beta-glucanase) (Beta-1,3-endoglucanase) - Solanum tuberosum (Potato), Glycosyl hydrolase superfamily protein | FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity | INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress | LOCATED IN: cell wall, plasma membrane | EXPRESSED IN: 11 plant structures | EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible | CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core , Glycoside hydrolase, family 17 , Glycoside hydrolase, subgroup, catalytic core | BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
| GO:0002215 | ISO | PLAZA Integrative Orthology | defense response to nematode | AT4G16260 |
| GO:0050832 | ISO | PLAZA Integrative Orthology | defense response to fungus | AT4G16260 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | AT4G16260 |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT4G16260 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 50.3.2 | Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase |