Gene: Sopen01g025820

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g025820
  • Transcript Identifier Sopen01g025820.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 78727614-78728492 : positive

Gene Family Information

  • ID HOM05D001971
  • #Genes/#Species 335/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g025820.1

Descriptions

  • Description crooked neck protein, putative / cell cycle protein, putative | FUNCTIONS IN: binding | INVOLVED IN: RNA processing | LOCATED IN: intracellular | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical , RNA-processing protein, HAT helix , Tetratricopeptide repeat-containing | BEST Arabidopsis thaliana protein match is: crooked neck protein, putative / cell cycle protein, putative
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
InterProRNA processing
GO:0000398
IEA
InterPromRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR003107 HAT (Half-A-TPR) repeat
IPR045075 Pre-mRNA-splicing factor Syf1-like
Mapman id Description
16.2.5.2.6 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.component CRN/MAC10