Gene: Sopen01g023650

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g023650
  • Transcript Identifier Sopen01g023650.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 71982075-71985309 : positive

Gene Family Information

  • ID HOM05D000621
  • #Genes/#Species 920/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g023650.1

Descriptions

  • Description agenet domain-containing protein | FUNCTIONS IN: RNA binding | LOCATED IN: cellular_component unknown | EXPRESSED IN: 11 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: Tudor-like, plant , Agenet | BEST Arabidopsis thaliana protein match is: agenet domain-containing protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0036123
ISO
PLAZA Integrative Orthologyhistone H3-K9 dimethylation AT1G09320
GO:0044030
ISO
PLAZA Integrative Orthologyregulation of DNA methylation AT1G09320
GO:0006346
ISO
PLAZA Integrative OrthologyDNA methylation-dependent heterochromatin assembly AT1G09320

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042393
ISO
PLAZA Integrative Orthologyhistone binding AT1G09320
GO:0035064
ISO
PLAZA Integrative Orthologymethylated histone binding AT1G09320

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G09320
GO:0000792
ISO
PLAZA Integrative Orthologyheterochromatin AT1G09320
GO:0000775
ISO
PLAZA Integrative Orthologychromosome, centromeric region AT1G09320

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008395 Agenet-like domain
IPR014002 Agenet domain, plant type
Mapman id Description
12.3.3.9.1 Chromatin organisation.post-translational histone modification.histone lysine methylation.histone methylation reader activities.histone H3K9 methylation reader (AGDP1)