Gene: Sopen01g016850

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g016850
  • Transcript Identifier Sopen01g016850.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 47448990-47453111 : negative

Gene Family Information

  • ID HOM05D000415
  • #Genes/#Species 1224/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g016850.1

Descriptions

  • Description TCP-1/cpn60 chaperonin family protein | FUNCTIONS IN: ATP binding | INVOLVED IN: protein folding, protein refolding, cellular protein metabolic process | LOCATED IN: in 7 components | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 , Chaperonin Cpn60, conserved site , Chaperonin Cpn60 | BEST Arabidopsis thaliana protein match is: chaperonin 60 beta
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT1G55490
GO:0009627
ISO
PLAZA Integrative Orthologysystemic acquired resistance AT1G55490
GO:0008219
ISO
PLAZA Integrative Orthologycell death AT1G55490
GO:0042026
IEA
InterProprotein refolding
GO:0006457
ISO
PLAZA Integrative Orthologyprotein folding AT1G55490
GO:0051085
ISO
PLAZA Integrative Orthologychaperone cofactor-dependent protein refolding AT1G55490

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G55490
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G55490
GO:0019904
ISO
PLAZA Integrative Orthologyprotein domain specific binding AT1G55490
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0005524
IEA
InterProATP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G56500
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G56500
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT1G55490
GO:0010319
ISO
PLAZA Integrative Orthologystromule AT1G55490
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G55490
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G13470
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G55490
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G13470
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT1G55490
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT1G55490
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT1G55490

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027413 GroEL-like equatorial domain superfamily
IPR001844 Chaperonin Cpn60
IPR027409 GroEL-like apical domain superfamily
IPR027410 TCP-1-like chaperonin intermediate domain superfamily
IPR002423 Chaperonin Cpn60/TCP-1 family
Mapman id Description
1.1.8.1.6.2.2 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and maintenance.Cpn60 chaperonin heterodimer.subunit beta
1.2.1.2.1.2 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.RuBisCo assembly.CPN60 chaperonin heterodimer.subunit beta
19.1.7.1 Protein homeostasis.protein quality control.Hsp60 chaperone system.chaperone (Hsp60)