Gene: Sopen01g004960
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen01g004960
- Transcript Identifier Sopen01g004960.1
- Gene Type Coding gene
- Location Spenn-ch01 : 3980363-3980905 : negative
Gene Family Information
- ID HOM05D000078
- #Genes/#Species 3763/97
- Phylogenetic origin
- ID ORTHO05D000025
- #Genes/#Species 3714/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen01g004960.1
Descriptions
- Description Encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF2). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to low temperature, abscisic acid, and circadian rhythm. Overexpressing this gene leads to increased freeze tolerance and induces the expression level of 85 cold-induced genes and reduces the expression level of 8 cold-repressed genes, which constitute the CBF2 regulon. Mutations in CBF2 increases the expression level of CBF1 and CBF3, suggesting that this gene may be involved in a negative regulatory or feedback circuit of the CBF pathway. | C-repeat/DRE binding factor 2 (CBF2) | CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type , Pathogenesis-related transcriptional factor/ERF, DNA-binding | BEST Arabidopsis thaliana protein match is: C-repeat/DRE binding factor 1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
GO:0003677 | IEA | InterPro | DNA binding |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
15.5.7.2 | RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (DREB) |