Gene: Sopen01g004420
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen01g004420
- Transcript Identifier Sopen01g004420.1
- Gene Type Coding gene
- Location Spenn-ch01 : 3283739-3290189 : negative
Gene Family Information
- ID HOM05D005815
- #Genes/#Species 134/90
- Phylogenetic origin
- ID ORTHO05D007023
- #Genes/#Species 135/90
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen01g004420.1
Descriptions
- Description Required for biosynthesis of the tetrapyrrole phytochrome chromophore phytochromobilin. Encodes phytochromobilin synthase, a ferredoxin-dependent biliverdin reductase. It is necessary for coupling the expression of some nuclear genes to the functional state of the chloroplast. | ELONGATED HYPOCOTYL 2 (HY2) | CONTAINS InterPro DOMAIN/s: Ferredoxin-dependent bilin reductase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010024 | IEA | InterPro | phytochromobilin biosynthetic process | |
| GO:0010019 | ISO | PLAZA Integrative Orthology | chloroplast-nucleus signaling pathway | AT3G09150 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016636 | IEA | InterPro | oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor | |
| GO:0050897 | IEA | InterPro | cobalt ion binding | |
| GO:0050619 | ISO | PLAZA Integrative Orthology | phytochromobilin:ferredoxin oxidoreductase activity | AT3G09150 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G09150 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR009249 | Ferredoxin-dependent bilin reductase |
| Mapman id | Description |
|---|---|
| 7.12.5.3 | Coenzyme metabolism.tetrapyrrol biosynthesis.heme biosynthesis and modification.phytochromobilin synthase |