Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen00g011420 Solanum pennellii HOM05D000792 ORTHO05D004195 3.5e-72 275.4 203 100.0
Sopen01g041660 Solanum pennellii HOM05D000792 ORTHO05D004195 4.9e-58 228.4 117 99.1
Solyc01g098090.3 Solanum lycopersicum HOM05D000792 ORTHO05D004195 1.1e-57 227.3 117 99.1
Nitab4.5_0000245g0030 Nicotiana tabacum HOM05D000792 ORTHO05D004195 1.5e-54 216.9 189 82.0
Nitab4.5_0006443g0030 Nicotiana tabacum HOM05D000792 ORTHO05D004195 4.3e-54 215.3 117 94.0
Peaxi162Scf00225g00310 Petunia axillaris HOM05D000792 ORTHO05D004195 9.6e-54 214.2 117 93.2
Peaxi162Scf00071g00939 Petunia axillaris HOM05D000792 ORTHO05D004195 1.6e-48 196.8 117 84.6
Dinv17744 Davidia involucrata HOM05D000792 ORTHO05D004195 7.9e-48 194.5 190 57.4
Sabra13G0033000 Salix brachista HOM05D000792 ORTHO05D004195 1.9e-46 189.9 188 57.4
Solyc08g023590.4 Solanum lycopersicum HOM05D000792 ORTHO05D004195 1.9e-46 189.9 117 81.2
Sopen08g008890 Solanum pennellii HOM05D000792 ORTHO05D004195 4.3e-46 188.7 117 80.3
Haze_04306 Corylus avellana HOM05D000792 ORTHO05D004195 5.6e-46 188.3 118 78.8
GSVIVG01021896001 Vitis vinifera HOM05D000792 ORTHO05D004195 5.6e-46 188.3 118 79.7
FAN05G0287 Fragaria x ananassa HOM05D000792 ORTHO05D004195 1.6e-45 186.8 188 55.9
Nitab4.5_0000087g0250 Nicotiana tabacum HOM05D000792 ORTHO05D004195 1.6e-45 186.8 206 59.7
CiPaw.07G009200 Carya illinoinensis HOM05D000792 ORTHO05D004195 2.1e-45 186.4 118 78.0
QL03p000120 Quercus lobata HOM05D000792 ORTHO05D004195 3.6e-45 185.7 118 78.0
Rhsim05G0148700 Rhododendron simsii HOM05D000792 ORTHO05D004195 4.8e-45 185.3 118 78.0
CSS0015984 Camellia sinensis var. sinensis HOM05D000792 ORTHO05D004195 8.1e-45 184.5 118 78.0
CSS0038276 Camellia sinensis var. sinensis HOM05D000792 ORTHO05D004195 8.1e-45 184.5 118 78.0
Cc02_g31260 Coffea canephora HOM05D000792 ORTHO05D004195 8.1e-45 184.5 118 80.5
Manes.08G126500 Manihot esculenta HOM05D000792 ORTHO05D004195 1.1e-44 184.1 118 78.0
Thecc.05G291700 Theobroma cacao HOM05D000792 ORTHO05D004195 1.4e-44 183.7 118 74.6
Actinidia05754 Actinidia chinensis HOM05D000792 ORTHO05D004195 1.8e-44 183.3 118 77.1
CSS0027954 Camellia sinensis var. sinensis HOM05D000792 ORTHO05D004195 1.8e-44 183.3 118 76.3
CSS0043695 Camellia sinensis var. sinensis HOM05D000792 ORTHO05D004195 1.8e-44 183.3 118 76.3
Lj9A672G81 Lonicera japonica HOM05D000792 ORTHO05D004195 1.8e-44 183.3 118 77.1
Potri.013G033800 Populus trichocarpa HOM05D000792 ORTHO05D004195 2.4e-44 183.0 118 78.8
Prupe.6G336900 Prunus persica HOM05D000792 ORTHO05D004195 2.4e-44 183.0 118 78.8
Sabra05G0042400 Salix brachista HOM05D000792 ORTHO05D004195 3.1e-44 182.6 117 78.6
DCAR_029743 Daucus carota HOM05D000792 ORTHO05D004195 4.0e-44 182.2 187 63.1
Cpa.g.sc117.38 Carica papaya HOM05D000792 ORTHO05D004195 5.3e-44 181.8 118 74.6
Duzib177G0519 Durio zibethinus HOM05D000792 ORTHO05D004195 5.3e-44 181.8 120 73.3
Hma1.2p1_0083F.1_g042650 Hydrangea macrophylla HOM05D000792 ORTHO05D004195 5.3e-44 181.8 118 77.1
Manes.09G158100 Manihot esculenta HOM05D000792 ORTHO05D004195 5.3e-44 181.8 118 75.4
Dinv03363 Davidia involucrata HOM05D000792 ORTHO05D004195 6.9e-44 181.4 118 77.1
Sed0009127 Sechium edule HOM05D000792 ORTHO05D004195 1.5e-43 180.3 118 77.1
vmacro19671 Vaccinium macrocarpon HOM05D000792 ORTHO05D004195 1.5e-43 180.3 118 76.3
Atru.chr2.653 Acer truncatum HOM05D000792 ORTHO05D004195 2.6e-43 179.5 118 74.6
TWI36G0731 Tripterygium wilfordii HOM05D000792 ORTHO05D004195 3.4e-43 179.1 118 76.3
ClCG02G016330 Citrullus lanatus HOM05D000792 ORTHO05D004195 4.5e-43 178.7 118 75.4
Gohir.D13G176800 Gossypium hirsutum HOM05D000792 ORTHO05D004195 4.5e-43 178.7 118 72.9
Gorai.013G202200 Gossypium raimondii HOM05D000792 ORTHO05D004195 4.5e-43 178.7 118 72.9
RcHm_v2.0_Chr3g0452571 Rosa chinensis HOM05D000792 ORTHO05D004195 4.5e-43 178.7 118 73.7
TWI12G0870 Tripterygium wilfordii HOM05D000792 ORTHO05D004195 5.8e-43 178.3 118 77.1
MELO3C004353.2 Cucumis melo HOM05D000792 ORTHO05D004195 7.6e-43 177.9 118 75.4
COL.COLO4_13633 Corchorus olitorius HOM05D000792 ORTHO05D004195 9.9e-43 177.6 118 72.0
CsaV3_2G004410 Cucumis sativus L. HOM05D000792 ORTHO05D004195 9.9e-43 177.6 118 74.6
Ciclev10000367m.g Citrus clementina HOM05D000792 ORTHO05D004195 1.3e-42 177.2 118 75.4
CiPaw.08G177700 Carya illinoinensis HOM05D000792 ORTHO05D004195 1.7e-42 176.8 118 74.6
Lj7C479G6 Lonicera japonica HOM05D000792 ORTHO05D004195 2.2e-42 176.4 118 73.7
Glyma.03G243800 Glycine max HOM05D000792 ORTHO05D004195 2.9e-42 176.0 118 72.0
Medtr1g081830 Medicago truncatula HOM05D000792 ORTHO05D004195 2.9e-42 176.0 117 73.5
FvH4_6g03981 Fragaria vesca HOM05D000792 ORTHO05D004195 3.8e-42 175.6 116 75.0
FAN09G2107 Fragaria x ananassa HOM05D000792 ORTHO05D004195 3.8e-42 175.6 116 75.0
Potri.005G046500 Populus trichocarpa HOM05D000792 ORTHO05D004195 3.8e-42 175.6 117 76.1
FAN02G1626 Fragaria x ananassa HOM05D000792 ORTHO05D004195 4.9e-42 175.3 117 73.5
FAN14G0951 Fragaria x ananassa HOM05D000792 ORTHO05D004195 4.9e-42 175.3 118 74.6
Gorai.013G122600 Gossypium raimondii HOM05D000792 ORTHO05D004195 4.9e-42 175.3 118 72.0
SGA_v2.0_scaffold15G07272 Striga asiatica HOM05D000792 ORTHO05D004195 4.9e-42 175.3 119 73.9
Glyma.19G241300 Glycine max HOM05D000792 ORTHO05D004195 6.4e-42 174.9 118 71.2
Gohir.A13G171400 Gossypium hirsutum HOM05D000792 ORTHO05D004195 8.4e-42 174.5 118 72.0
FAN05G4969 Fragaria x ananassa HOM05D000792 ORTHO05D004195 1.1e-41 174.1 116 75.0
arahy.Tifrunner.gnm1.ann1.GRVM6J Arachis hypogaea HOM05D000792 ORTHO05D004195 1.4e-41 173.7 118 72.0
arahy.Tifrunner.gnm1.ann1.JA3EPN Arachis hypogaea HOM05D000792 ORTHO05D004195 1.4e-41 173.7 118 72.0
Sed0026552 Sechium edule HOM05D000792 ORTHO05D004195 1.4e-41 173.7 118 74.6
Ah.06g192810 Amaranthus hybridus HOM05D000792 ORTHO05D004195 2.4e-41 172.9 116 71.6
Gohir.D13G109000 Gossypium hirsutum HOM05D000792 ORTHO05D004195 2.4e-41 172.9 118 71.2
Lj5g0000884 Lotus japonicus HOM05D000792 ORTHO05D004195 2.4e-41 172.9 118 72.9
TAR365G0075 Trochodendron aralioides HOM05D000792 ORTHO05D004195 4.2e-41 172.2 119 74.8
Psat0s4348g0040 Pisum sativum HOM05D000792 ORTHO05D004195 7.1e-41 171.4 117 72.6
Hund22093 Selenicereus undatus HOM05D000792 ORTHO05D004195 1.2e-40 170.6 117 69.2
Gohir.A13G106300 Gossypium hirsutum HOM05D000792 ORTHO05D004195 2.1e-40 169.9 118 70.3
THA.LOC104821692 Tarenaya hassleriana HOM05D000792 ORTHO05D004195 2.1e-40 169.9 118 71.2
Phvul.006G098200 Phaseolus vulgaris HOM05D000792 ORTHO05D004195 2.7e-40 169.5 118 68.6
CDE09G0368 Ceratophyllum demersum HOM05D000792 ORTHO05D004195 3.5e-40 169.1 191 50.8
AUR62005021 Chenopodium quinoa HOM05D000792 ORTHO05D004195 4.6e-40 168.7 117 69.2
Gohir.D08G230900 Gossypium hirsutum HOM05D000792 ORTHO05D004195 6.0e-40 168.3 118 69.5
Lsat_1_v5_gn_8_29340 Lactuca sativa HOM05D000792 ORTHO05D004195 6.0e-40 168.3 118 71.2
Nn3g21306 Nelumbo nucifera HOM05D000792 ORTHO05D004195 6.0e-40 168.3 119 73.9
Aa31LG5G15360 Aethionema arabicum HOM05D000792 ORTHO05D004195 7.9e-40 167.9 118 68.6
Eucgr.H04403 Eucalyptus grandis HOM05D000792 ORTHO05D004195 7.9e-40 167.9 118 71.2
Gorai.004G245300 Gossypium raimondii HOM05D000792 ORTHO05D004195 7.9e-40 167.9 118 68.6
TAR362G0581 Trochodendron aralioides HOM05D000792 ORTHO05D004195 7.9e-40 167.9 198 62.6
THA.LOC104818655 Tarenaya hassleriana HOM05D000792 ORTHO05D004195 1.0e-39 167.5 117 70.1
VMungo0540G1958 Vigna mungo HOM05D000792 ORTHO05D004195 1.0e-39 167.5 118 68.6
Duzib106G0823 Durio zibethinus HOM05D000792 ORTHO05D004195 1.3e-39 167.2 118 68.6
MD12G1233700 Malus domestica HOM05D000792 ORTHO05D004195 1.3e-39 167.2 118 72.0
Phvul.006G097800 Phaseolus vulgaris HOM05D000792 ORTHO05D004195 1.3e-39 167.2 118 68.6
BcaB04g19281 Brassica carinata HOM05D000792 ORTHO05D004195 1.8e-39 166.8 118 69.5
Lj1g0010529 Lotus japonicus HOM05D000792 ORTHO05D004195 1.8e-39 166.8 116 69.8
TAR636G2564 Trochodendron aralioides HOM05D000792 ORTHO05D004195 1.8e-39 166.8 118 74.6
Oeu050775.1 Olea europaea HOM05D000792 ORTHO05D004195 3.0e-39 166.0 118 72.9
Glyma.03G244500 Glycine max HOM05D000792 ORTHO05D004195 3.9e-39 165.6 118 67.8
Sc09g0003670 Simmondsia chinensis HOM05D000792 ORTHO05D004195 3.9e-39 165.6 118 71.2
Ca_10069_v3 Cicer arietinum L. HOM05D000792 ORTHO05D004195 5.1e-39 165.2 118 71.2
Migut.K00761 Erythranthe guttata HOM05D000792 ORTHO05D004195 5.1e-39 165.2 118 70.3
Aqoxy2G03096 Aquilegia oxysepala HOM05D000792 ORTHO05D004195 6.7e-39 164.9 119 74.8
EL10Ac4g09219 Beta vulgaris HOM05D000792 ORTHO05D004195 6.7e-39 164.9 118 66.9
Gohir.D11G267100 Gossypium hirsutum HOM05D000792 ORTHO05D004195 6.7e-39 164.9 118 69.5
CDE02G3582 Ceratophyllum demersum HOM05D000792 ORTHO05D004195 8.7e-39 164.5 121 69.4
Ca_09396_v3 Cicer arietinum L. HOM05D000792 ORTHO05D004195 8.7e-39 164.5 118 68.6
Gohir.A08G213900 Gossypium hirsutum HOM05D000792 ORTHO05D004195 8.7e-39 164.5 118 67.8
Gohir.A11G257200 Gossypium hirsutum HOM05D000792 ORTHO05D004195 8.7e-39 164.5 118 68.6
Oeu004838.1 Olea europaea HOM05D000792 ORTHO05D004195 8.7e-39 164.5 118 72.9
Gorai.007G286900 Gossypium raimondii HOM05D000792 ORTHO05D004195 1.1e-38 164.1 118 69.5
MD04G1217000 Malus domestica HOM05D000792 ORTHO05D004195 1.1e-38 164.1 118 70.3
Sp2g20380 Schrenkiella parvula HOM05D000792 ORTHO05D004195 1.1e-38 164.1 118 68.6
SalBow5G1543 Salvia bowleyana HOM05D000792 ORTHO05D004195 1.9e-38 163.3 128 68.8
A05p42490 Brassica napus HOM05D000792 ORTHO05D004195 3.3e-38 162.5 117 68.4
BraA05t23003Z Brassica rapa HOM05D000792 ORTHO05D004195 3.3e-38 162.5 117 68.4
MBI19_g08863_MAGBIO Magnolia biondii HOM05D000792 ORTHO05D004195 3.3e-38 162.5 119 72.3
MBI18_g25810_MAGBIO Magnolia biondii HOM05D000792 ORTHO05D004195 4.3e-38 162.2 210 48.6
MSTRG.3420 Avicennia marina HOM05D000792 ORTHO05D004195 5.6e-38 161.8 118 72.0
VMungo0540G0969 Vigna mungo HOM05D000792 ORTHO05D004195 5.6e-38 161.8 117 68.4
CARHR079410 Cardamine hirsuta HOM05D000792 ORTHO05D004195 7.4e-38 161.4 119 68.9
Oeu003790.1 Olea europaea HOM05D000792 ORTHO05D004195 7.4e-38 161.4 118 69.5
ECA233G2068 Erigeron canadensis HOM05D000792 ORTHO05D004195 1.3e-37 160.6 118 67.8
C05p62150 Brassica napus HOM05D000792 ORTHO05D004195 1.6e-37 160.2 117 67.5
BolC5t34873H Brassica oleracea HOM05D000792 ORTHO05D004195 1.6e-37 160.2 117 67.5
PSO170G0948 Papaver somniferum HOM05D000792 ORTHO05D004195 2.1e-37 159.8 119 69.7
BcaC05g29993 Brassica carinata HOM05D000792 ORTHO05D004195 2.8e-37 159.5 118 66.9
Medtr7g114370 Medicago truncatula HOM05D000792 ORTHO05D004195 2.8e-37 159.5 118 66.9
TPR.G7014 Trifolium pratense HOM05D000792 ORTHO05D004195 2.8e-37 159.5 117 66.7
Duzib128G1364 Durio zibethinus HOM05D000792 ORTHO05D004195 3.7e-37 159.1 118 64.4
Lsat_1_v5_gn_0_840 Lactuca sativa HOM05D000792 ORTHO05D004195 3.7e-37 159.1 117 70.1
Glyma.19G241800 Glycine max HOM05D000792 ORTHO05D004195 6.2e-37 158.3 118 66.1
ATR0772G088 Amborella trichopoda HOM05D000792 ORTHO05D004195 8.1e-37 157.9 119 68.9
BraA03t12573Z Brassica rapa HOM05D000792 ORTHO05D004195 1.1e-36 157.5 118 67.8
Thhalv10020130m.g Eutrema salsugineum HOM05D000792 ORTHO05D004195 1.1e-36 157.5 119 67.2
A03p33980 Brassica napus HOM05D000792 ORTHO05D004195 2.4e-36 156.4 118 66.9
AT3G05090 Arabidopsis thaliana HOM05D000792 ORTHO05D004195 4.0e-36 155.6 118 66.1
BcaC01g04335 Brassica carinata HOM05D000792 ORTHO05D004195 4.0e-36 155.6 118 66.9
C03p41360 Brassica napus HOM05D000792 ORTHO05D004195 4.0e-36 155.6 118 66.9
BolC3t16419H Brassica oleracea HOM05D000792 ORTHO05D004195 4.0e-36 155.6 118 66.9
Psat3g008760 Pisum sativum HOM05D000792 ORTHO05D004195 5.3e-36 155.2 118 66.9
HPP92_016897 Vanilla planifolia HOM05D000792 ORTHO05D004195 5.3e-36 155.2 189 74.1
Glyma.10G159000 Glycine max HOM05D000792 ORTHO05D004195 6.9e-36 154.8 119 66.4
HanXRQChr14g0429451 Helianthus annuus HOM05D000792 ORTHO05D004195 1.2e-35 154.1 118 66.1
Sp3g03910 Schrenkiella parvula HOM05D000792 ORTHO05D004195 1.2e-35 154.1 118 66.1
Carub.0003s0433 Capsella rubella HOM05D000792 ORTHO05D004195 2.0e-35 153.3 119 67.2
SHI18278 Sapria himalayana HOM05D000792 ORTHO05D004195 2.0e-35 153.3 195 56.9
AL3G15470 Arabidopsis lyrata HOM05D000792 ORTHO05D004195 2.6e-35 152.9 119 66.4
arahy.Tifrunner.gnm1.ann1.GH6CGE Arachis hypogaea HOM05D000792 ORTHO05D004195 7.6e-35 151.4 118 67.8
HanXRQChr16g0498011 Helianthus annuus HOM05D000792 ORTHO05D004195 1.3e-34 150.6 117 65.0
Lalb_Chr15g0076961 Lupinus albus HOM05D000792 ORTHO05D004195 2.2e-34 149.8 117 65.0
Lalb_Chr18g0045241 Lupinus albus HOM05D000792 ORTHO05D004195 3.2e-33 146.0 118 63.6
Zm00001eb139400 Zea mays HOM05D000792 ORTHO05D004195 2.1e-32 143.3 118 61.0
RcHm_v2.0_Chr2g0132051 Rosa chinensis HOM05D000792 ORTHO05D004195 4.6e-32 142.1 102 68.6
VMungo0720G0333 Vigna mungo HOM05D000792 ORTHO05D004195 1.3e-31 140.6 118 61.9
Zm00001eb407650 Zea mays HOM05D000792 ORTHO05D004195 2.3e-31 139.8 118 61.9
SEGI_34645 Sequoiadendron giganteum HOM05D000792 ORTHO05D004195 8.7e-31 137.9 120 62.5
Lsat_1_v5_gn_2_6701 Lactuca sativa HOM05D000792 ORTHO05D004195 1.5e-30 137.1 119 63.9
Os12g0165000 Oryza sativa ssp. japonica HOM05D000792 ORTHO05D004195 4.3e-30 135.6 118 58.5
HanXRQChr12g0366721 Helianthus annuus HOM05D000792 ORTHO05D004195 2.4e-28 129.8 117 59.8
Pp3c2_9310 Physcomitrium patens HOM05D000792 ORTHO05D004195 1.3e-26 124.0 121 57.9
Glyma.16G018700 Glycine max HOM05D000792 ORTHO05D004195 4.2e-25 119.0 86 69.8
Pp3c14_23300 Physcomitrium patens HOM05D000792 ORTHO05D004195 3.5e-24 115.9 119 52.9
Pp3c1_36050 Physcomitrium patens HOM05D000792 ORTHO05D004195 4.6e-24 115.5 120 53.3
PGR004G0598 Punica granatum HOM05D000792 ORTHO05D004195 6.1e-24 115.2 93 63.4
SMO367G0211 Selaginella moellendorffii HOM05D000792 ORTHO05D004195 6.7e-23 111.7 118 50.8
Phvul.007G184400 Phaseolus vulgaris HOM05D000792 ORTHO05D004195 4.1e-20 102.4 86 64.0
Mapoly0016s0038 Marchantia polymorpha HOM05D000792 ORTHO05D004195 9.0e-20 101.3 110 52.7
AagrBONN_evm.TU.Sc2ySwM_369.430 Anthoceros agrestis HOM05D000792 ORTHO05D004195 2.6e-19 99.8 121 47.1
CBR_g51918 Chara braunii HOM05D000792 ORTHO05D004195 1.3e-18 97.4 129 41.9
Lsat_1_v5_gn_5_26640 Lactuca sativa HOM05D000792 ORTHO05D004195 1.1e-17 94.4 93 55.9
Lsat_1_v5_gn_3_96121 Lactuca sativa HOM05D000792 ORTHO05D004195 3.2e-17 92.8 92 54.3
Zm00001eb333910 Zea mays HOM05D000792 ORTHO05D004195 3.9e-07 59.3 42 64.3


User provided reference genes

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