Gene: Sopen00g003680

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen00g003680
  • Transcript Identifier Sopen00g003680.1
  • Gene Type Coding gene
  • Location Spenn-ch00 : 8841911-8845477 : negative

Gene Family Information

  • ID HOM05D000112
  • #Genes/#Species 3032/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen00g003680.1

Descriptions

  • Description Encodes an auxin response factor that contains the conserved VP1-B3 DNA-binding domain at its N-terminus and the Aux/IAA-like domains III and IV present in most ARFs at its C-terminus. The protein interacts with IAA1 (yeast two hybrid) and other auxin response elements such as ER7 and ER9 (yeast one hybrid). ARF19 protein can complement many aspects of the arf7 mutant phenotype and , together with ARF7, is involved in the response to ethylene. In the arf7 arf19 double mutant, several auxin-responsive genes (e.g. IAA5, LBD16, LBD29 and LBD33) are no longer upregulated by auxin. | auxin response factor 19 (ARF19) | CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation , Transcriptional factor B3 , AUX/IAA protein , Auxin response factor | BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009725
IEA
InterProresponse to hormone

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR044835 Auxin response factor
IPR010525 Auxin response factor domain
IPR033389 AUX/IAA domain
Mapman id Description
15.5.5.1 RNA biosynthesis.transcriptional regulation.B3 transcription factor superfamily.transcription factor (ARF)