Gene: Solyc12g096190.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g096190.2
  • Transcript Identifier Solyc12g096190.2.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 64732368-64735207 : positive

Gene Family Information

  • ID HOM05D002267
  • #Genes/#Species 297/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g096190.2.1
  • uniprot A0A3Q7JDP0
  • gene_id Solyc12g096190

Descriptions

  • Description Tryptophan synthase beta chain (AHRD V3.3 *** Q9FFW8_ARATH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000162
IBA
IEA
GOA Databasetryptophan biosynthetic process
GO:0000162
IEA
InterProtryptophan biosynthetic process
GO:0006568
IEA
GOA Databasetryptophan metabolic process
GO:0006568
IEA
InterProtryptophan metabolic process
GO:0008652
IEA
GOA Databasecellular amino acid biosynthetic process
GO:0009073
IEA
GOA Databasearomatic amino acid family biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004834
IEA
GOA Databasetryptophan synthase activity
GO:0004834
IEA
InterProtryptophan synthase activity
GO:0030170
IEA
GOA Databasepyridoxal phosphate binding
GO:0030170
IEA
InterPropyridoxal phosphate binding
GO:0016829
IEA
GOA Databaselyase activity
GO:0052684
IBA
GOA DatabaseL-serine hydro-lyase (adding indole, L-tryptophan-forming) activity
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT5G38530
GO:0003824
ISO
PLAZA Homology (enrichment)catalytic activity HOM05D002267
GO:0046537
ISO
PLAZA Homology (enrichment)2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity HOM05D002267

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023026 Tryptophan synthase beta chain/beta chain-like
IPR006654 Tryptophan synthase, beta chain
IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme
IPR006316 Tryptophan synthase, beta chain-like
IPR001926 Pyridoxal-phosphate dependent enzyme
Mapman id Description
35.1 not assigned.annotated