Gene: Solyc12g089210.2
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc12g089210.2
- Transcript Identifier Solyc12g089210.2.1
- Gene Type Coding gene
- Location SL4.0ch12 : 63886071-63890270 : negative
Gene Family Information
- ID HOM05D004347
- #Genes/#Species 164/97
- Phylogenetic origin
- ID ORTHO05D005270
- #Genes/#Species 161/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc12g089210.2.1
- uniprot A0A3Q7JD34
- gene_id Solyc12g089210
Descriptions
- Description Ornithine carbamoyltransferase (AHRD V3.3 *** A0A2G2YA09_CAPAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006520 | IEA | GOA Database | cellular amino acid metabolic process | |
| GO:0006520 | IEA | InterPro | cellular amino acid metabolic process | |
| GO:0006591 | IEA | GOA Database | ornithine metabolic process | |
| GO:0042450 | IBA | GOA Database | arginine biosynthetic process via ornithine | |
| GO:0019240 | IBA | GOA Database | citrulline biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016597 | IEA | GOA Database | amino acid binding | |
| GO:0016597 | IEA | InterPro | amino acid binding | |
| GO:0016743 | IEA | GOA Database | carboxyl- or carbamoyltransferase activity | |
| GO:0016743 | IEA | InterPro | carboxyl- or carbamoyltransferase activity | |
| GO:0004585 | IBA IEA | GOA Database | ornithine carbamoyltransferase activity | |
| GO:0016740 | IEA | GOA Database | transferase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043231 | IBA | GOA Database | intracellular membrane-bounded organelle | |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT1G75330 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G75330 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR006131 | Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain |
| IPR036901 | Aspartate/ornithine carbamoyltransferase superfamily |
| IPR006132 | Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding |
| IPR002292 | Ornithine/putrescine carbamoyltransferase |
| IPR006130 | Aspartate/ornithine carbamoyltransferase |
| Mapman id | Description |
|---|---|
| 4.1.1.1.2.2 | Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.arginine.ornithine carbamoyltransferase |